Sopen01g027560

Description : NB-ARC domain

Gene families : OG_42_0000010 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Solanum release: Sopen01g027560
Cluster	HCCA clusters: Cluster_331

Target	Alias	Description	ECC score	Gene Family Method
A4A49_16559	No alias	tmv resistance protein n	0.03	Orthogroups_2024-Update
At5g41550	No alias	Disease resistance protein (TIR-NBS-LRR class) family...	0.02	Orthogroups_2024-Update
Brara.B02903.1	No alias	effector receptor *(NLR)	0.03	Orthogroups_2024-Update
Brara.I01369.1	No alias	effector receptor *(NLR)	0.02	Orthogroups_2024-Update
Brara.I01803.1	No alias	effector receptor *(NLR)	0.02	Orthogroups_2024-Update
Brara.I04821.1	No alias	effector receptor *(NLR)	0.03	Orthogroups_2024-Update
Glyma.03G077400	No alias	Disease resistance protein (TIR-NBS-LRR class) family	0.03	Orthogroups_2024-Update
Glyma.12G132200	No alias	disease resistance protein (TIR-NBS-LRR class), putative	0.02	Orthogroups_2024-Update
Glyma.14G151100	No alias	disease resistance protein (TIR-NBS-LRR class), putative	0.03	Orthogroups_2024-Update
Glyma.16G128020	No alias	disease resistance protein (TIR-NBS-LRR class), putative	0.03	Orthogroups_2024-Update
Glyma.16G135200	No alias	disease resistance protein (TIR-NBS-LRR class), putative	0.03	Orthogroups_2024-Update
Potri.013G097000	No alias	disease resistance protein (TIR-NBS-LRR class), putative	0.03	Orthogroups_2024-Update
Solyc01g066020	No alias	disease resistance protein (TIR-NBS-LRR class) (AHRD...	0.02	Orthogroups_2024-Update
Solyc08g005510	No alias	disease resistance protein (TIR-NBS-LRR class) (AHRD...	0.02	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0043531	ADP binding	IEA	InterProScan predictions
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR002182	NB-ARC	68	149

External Links

No external refs found!