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  5. Sopen01g027910

Sopen01g027910


Description : Glycosyl hydrolases family 16


Gene families : OG_42_0000032 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000032_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Sopen01g027910
Cluster HCCA clusters: Cluster_63

Target Alias Description ECC score Gene Family Method Actions
At4g13080 No alias xyloglucan endotransglucosylase/hydrolase 1... 0.03 Orthogroups_2024-Update
At5g65730 No alias Xyloglucan endotransglucosylase/hydrolase... 0.02 Orthogroups_2024-Update
GRMZM5G886185 No alias xyloglucan endotransglucosylase/hydrolase 12 0.03 Orthogroups_2024-Update
Glyma.05G163900 No alias xyloglucan endotransglucosylase/hydrolase 16 0.02 Orthogroups_2024-Update
Glyma.11G193600 No alias xyloglucan endotransglucosylase/hydrolase 32 0.03 Orthogroups_2024-Update
LOC_Os04g51460 No alias glycosyl hydrolases family 16, putative, expressed 0.02 Orthogroups_2024-Update
MA_20669g0010 No alias (at2g36870 : 290.0) xyloglucan... 0.03 Orthogroups_2024-Update
MA_262267g0010 No alias (at4g03210 : 255.0) encodes a member of xyloglucan... 0.04 Orthogroups_2024-Update
MA_781557g0010 No alias (at5g13870 : 271.0) EXGT-A4, endoxyloglucan... 0.02 Orthogroups_2024-Update
PSME_00005149-RA No alias (q41542|xth_wheat : 400.0) Probable xyloglucan... 0.03 Orthogroups_2024-Update
PSME_00017521-RA No alias (at4g03210 : 345.0) encodes a member of xyloglucan... 0.03 Orthogroups_2024-Update
PSME_00018475-RA No alias (at5g57550 : 323.0) xyloglucan... 0.02 Orthogroups_2024-Update
PSME_00019699-RA No alias (q39857|xth_soybn : 456.0) Probable xyloglucan... 0.03 Orthogroups_2024-Update
PSME_00040047-RA No alias (at2g36870 : 242.0) xyloglucan... 0.03 Orthogroups_2024-Update
PSME_00048668-RA No alias (p35694|bru1_soybn : 266.0) Brassinosteroid-regulated... 0.03 Orthogroups_2024-Update
Potri.001G071000 No alias xyloglucan endotransglucosylase/hydrolase 5 0.03 Orthogroups_2024-Update
Solyc01g099630 No alias xyloglucan endotransglucosylase-hydrolase 1 0.03 Orthogroups_2024-Update
Sopen03g023920 No alias Glycosyl hydrolases family 16 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEA InterProScan predictions
BP GO:0005975 carbohydrate metabolic process IEA InterProScan predictions
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR000757 GH16 28 92
No external refs found!