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  5. Solyc01g107490

Solyc01g107490


Description : basic helix-loop-helix (bHLH) DNA-binding superfamily protein (AHRD V3.3 *** AT3G19500.1)


Gene families : OG_42_0000766 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000766_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Solyc01g107490
Cluster HCCA clusters: Cluster_179

Target Alias Description ECC score Gene Family Method Actions
At1g05710 No alias Function unknown 0.03 Orthogroups_2024-Update
MA_504223g0010 No alias (at3g20640 : 139.0) basic helix-loop-helix (bHLH)... 0.03 Orthogroups_2024-Update
Potri.001G299300 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.02 Orthogroups_2024-Update
Potri.013G126800 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.04 Orthogroups_2024-Update
Seita.5G069700.1 No alias bHLH-type transcription factor 0.02 Orthogroups_2024-Update
Solyc07g063830 No alias bHLH transcription factor142 0.03 Orthogroups_2024-Update
Sopen08g005050 No alias hypothetical protein 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003954 NADH dehydrogenase activity IEP Predicted GO
MF GO:0008137 NADH dehydrogenase (ubiquinone) activity IEP Predicted GO
MF GO:0016491 oxidoreductase activity IEP Predicted GO
MF GO:0016655 oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor IEP Predicted GO
MF GO:0016837 carbon-oxygen lyase activity, acting on polysaccharides IEP Predicted GO
MF GO:0030570 pectate lyase activity IEP Predicted GO
MF GO:0050136 NADH dehydrogenase (quinone) activity IEP Predicted GO
MF GO:0051537 2 iron, 2 sulfur cluster binding IEP Predicted GO
BP GO:0055114 oxidation-reduction process IEP Predicted GO

No InterPro domains available for this sequence

No external refs found!