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  5. 437867

437867


Description : CTC-interacting domain 4


Gene families : OG_42_0003413 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0003413_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Selaginella: 437867
Cluster HCCA clusters: Cluster_103

Target Alias Description ECC score Gene Family Method Actions
Sopen03g040770 No alias LsmAD domain 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000375 RNA splicing, via transesterification reactions IEP Predicted GO
BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP Predicted GO
BP GO:0000398 mRNA splicing, via spliceosome IEP Predicted GO
MF GO:0004180 carboxypeptidase activity IEP Predicted GO
MF GO:0004185 serine-type carboxypeptidase activity IEP Predicted GO
CC GO:0005681 spliceosomal complex IEP Predicted GO
CC GO:0005739 mitochondrion IEP Predicted GO
BP GO:0006397 mRNA processing IEP Predicted GO
BP GO:0008380 RNA splicing IEP Predicted GO
BP GO:0016071 mRNA metabolic process IEP Predicted GO
MF GO:0070008 serine-type exopeptidase activity IEP Predicted GO
InterPro domains Description Start Stop
IPR009604 LsmAD_domain 154 224
IPR009818 Ataxin-2_C 358 371
IPR025852 SM_dom_ATX 1 79
No external refs found!