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  5. Sopen01g028890

Sopen01g028890


Description : Cullin family


Gene families : OG_42_0000877 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000877_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Sopen01g028890
Cluster HCCA clusters: Cluster_171

Target Alias Description ECC score Gene Family Method Actions
HORVU1Hr1G020390.1 No alias scaffold component *(CUL1) of SCF E3 ubiquitin ligase complexes 0.03 Orthogroups_2024-Update
Kfl00302_0020 kfl00302_0020_v1.1 (at4g02570 : 1106.0) Encodes a cullin that is a... 0.02 Orthogroups_2024-Update
LOC_Os05g05700 No alias cullin, putative, expressed 0.02 Orthogroups_2024-Update
Pp1s169_153V6 No alias atcul1 (cullin 1) 0.03 Orthogroups_2024-Update
Solyc01g067100 No alias cullin 1 (AHRD V3.3 *** AT4G02570.4) 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source
BP GO:0006511 ubiquitin-dependent protein catabolic process IEA InterProScan predictions
MF GO:0031625 ubiquitin protein ligase binding IEA InterProScan predictions
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR001373 Cullin_N 23 645
IPR019559 Cullin_neddylation_domain 672 734
No external refs found!