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Description : RING/U-box superfamily protein
Gene families : OG_42_0000003 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | Selaginella: 438800 | |
| Cluster | HCCA clusters: Cluster_191 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| A4A49_07471 | No alias | ring-h2 finger protein atl70 | 0.08 | Orthogroups_2024-Update | |
| A4A49_21361 | No alias | ring-h2 finger protein atl78 | 0.02 | Orthogroups_2024-Update | |
| A4A49_22293 | No alias | ring-h2 finger protein atl13 | 0.03 | Orthogroups_2024-Update | |
| A4A49_29197 | No alias | ring-h2 finger protein atl73 | 0.03 | Orthogroups_2024-Update | |
| At1g49200 | No alias | RING-H2 finger protein ATL75... | 0.02 | Orthogroups_2024-Update | |
| At1g76410 | No alias | ATL8 [Source:UniProtKB/TrEMBL;Acc:A0A178WF21] | 0.02 | Orthogroups_2024-Update | |
| At5g10380 | No alias | E3 ubiquitin-protein ligase RING1... | 0.02 | Orthogroups_2024-Update | |
| Bradi2g55990 | No alias | RING/U-box superfamily protein | 0.02 | Orthogroups_2024-Update | |
| Brara.A02910.1 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase | 0.02 | Orthogroups_2024-Update | |
| Brara.C03618.1 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase | 0.03 | Orthogroups_2024-Update | |
| Brara.I02379.1 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase | 0.02 | Orthogroups_2024-Update | |
| Brara.J02673.1 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase | 0.02 | Orthogroups_2024-Update | |
| Cre12.g516050 | No alias | RING/U-box superfamily protein | 0.01 | Orthogroups_2024-Update | |
| Glyma.09G253500 | No alias | RING/U-box superfamily protein | 0.03 | Orthogroups_2024-Update | |
| Glyma.18G060500 | No alias | RING/U-box superfamily protein | 0.02 | Orthogroups_2024-Update | |
| HORVU0Hr1G021450.9 | No alias | Unknown function | 0.03 | Orthogroups_2024-Update | |
| HORVU7Hr1G121010.1 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase | 0.02 | Orthogroups_2024-Update | |
| LOC_Os02g33720 | No alias | RING-H2 finger protein, putative, expressed | 0.02 | Orthogroups_2024-Update | |
| LOC_Os03g28080 | No alias | ring-H2 zinc finger protein, putative, expressed | 0.03 | Orthogroups_2024-Update | |
| MA_96368g0010 | No alias | (at5g17600 : 180.0) RING/U-box superfamily protein;... | 0.03 | Orthogroups_2024-Update | |
| PSME_00003023-RA | No alias | (at1g72200 : 141.0) RING/U-box superfamily protein;... | 0.03 | Orthogroups_2024-Update | |
| Pp1s71_157V6 | No alias | ac009177_16 ring-h2 zinc finger protein atl6 | 0.03 | Orthogroups_2024-Update | |
| Pp1s71_162V6 | No alias | ring finger | 0.01 | Orthogroups_2024-Update | |
| Seita.8G032100.1 | No alias | Unknown function | 0.03 | Orthogroups_2024-Update | |
| Seita.8G189600.1 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase | 0.04 | Orthogroups_2024-Update | |
| Sobic.002G416300.1 | No alias | Unknown function | 0.02 | Orthogroups_2024-Update | |
| Solyc01g066430 | No alias | RING/U-box superfamily protein (AHRD V3.3 *** AT2G47560.1) | 0.02 | Orthogroups_2024-Update | |
| Sopen01g032660 | No alias | Ring finger domain | 0.02 | Orthogroups_2024-Update | |
| Sopen02g012490 | No alias | Ring finger domain | 0.02 | Orthogroups_2024-Update | |
| Sopen03g031440 | No alias | Ring finger domain | 0.04 | Orthogroups_2024-Update | |
| Sopen04g036320 | No alias | Ring finger domain | 0.02 | Orthogroups_2024-Update | |
| Sopen06g015390 | No alias | Ring finger domain | 0.02 | Orthogroups_2024-Update | |
| Sopen11g001310 | No alias | Ring finger domain | 0.02 | Orthogroups_2024-Update | |
| Sopen12g024180 | No alias | Ring finger domain | 0.03 | Orthogroups_2024-Update |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0004842 | ubiquitin-protein transferase activity | IEP | Predicted GO |
| BP | GO:0006511 | ubiquitin-dependent protein catabolic process | IEP | Predicted GO |
| BP | GO:0007275 | multicellular organism development | IEP | Predicted GO |
| BP | GO:0009057 | macromolecule catabolic process | IEP | Predicted GO |
| BP | GO:0016567 | protein ubiquitination | IEP | Predicted GO |
| MF | GO:0019787 | ubiquitin-like protein transferase activity | IEP | Predicted GO |
| BP | GO:0019941 | modification-dependent protein catabolic process | IEP | Predicted GO |
| BP | GO:0032446 | protein modification by small protein conjugation | IEP | Predicted GO |
| BP | GO:0032501 | multicellular organismal process | IEP | Predicted GO |
| BP | GO:0032502 | developmental process | IEP | Predicted GO |
| BP | GO:0043632 | modification-dependent macromolecule catabolic process | IEP | Predicted GO |
| BP | GO:0044265 | cellular macromolecule catabolic process | IEP | Predicted GO |
| BP | GO:0048856 | anatomical structure development | IEP | Predicted GO |
| BP | GO:0051603 | proteolysis involved in cellular protein catabolic process | IEP | Predicted GO |
| BP | GO:0070647 | protein modification by small protein conjugation or removal | IEP | Predicted GO |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR001841 | Znf_RING | 98 | 142 |
| No external refs found! |