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  5. Sopen01g029100

Sopen01g029100


Description : Domain of unknown function (DUF588)


Gene families : OG_42_0000213 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000213_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Sopen01g029100
Cluster HCCA clusters: Cluster_61

Target Alias Description ECC score Gene Family Method Actions
A4A49_11943 No alias casp-like protein 1c2 0.03 Orthogroups_2024-Update
At2g27370 No alias Casparian strip membrane protein 3... 0.03 Orthogroups_2024-Update
At4g20390 No alias CASP-like protein 1B2 [Source:UniProtKB/Swiss-Prot;Acc:Q9SUP0] 0.03 Orthogroups_2024-Update
Glyma.03G209700 No alias Uncharacterised protein family (UPF0497) 0.03 Orthogroups_2024-Update
Pp1s20_129V6 No alias No description available 0.02 Orthogroups_2024-Update
Solyc02g067190 No alias CASP-like protein (AHRD V3.3 *** K4B751_SOLLC) 0.04 Orthogroups_2024-Update
Solyc02g078250 No alias CASP-like protein (AHRD V3.3 *** K4B950_SOLLC) 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR006702 CASP_dom 34 177
No external refs found!