Sopen01g029560

Description : CW-type Zinc Finger

Gene families : OG_42_0001605 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001605_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Solanum release: Sopen01g029560
Cluster	HCCA clusters: Cluster_385

Target	Alias	Description	ECC score	Gene Family Method
Bradi1g18607	No alias	CW-type Zinc Finger	0.02	Orthogroups_2024-Update
Kfl00359_0140	kfl00359_0140_v1.1	no hits & (original description: no original description)	0.02	Orthogroups_2024-Update
LOC_Os07g47360	No alias	CW-type Zinc Finger, putative, expressed	0.03	Orthogroups_2024-Update
PSME_00029102-RA	No alias	(at3g62900 : 171.0) CW-type Zinc Finger; FUNCTIONS IN:...	0.02	Orthogroups_2024-Update
Sopen02g028330	No alias	Heavy-metal-associated domain	0.05	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0008270	zinc ion binding	IEA	InterProScan predictions
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043169	cation binding	None	Extended
MF	GO:0046872	metal ion binding	None	Extended
MF	GO:0046914	transition metal ion binding	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR011124	Znf_CW	638	683

External Links

No external refs found!