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  4. Sequence
  5. 441720

441720


Description : pleiotropic drug resistance 7


Gene families : OG_42_0000055 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000055_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Selaginella: 441720
Cluster HCCA clusters: Cluster_200

Target Alias Description ECC score Gene Family Method Actions
Brara.D01781.1 No alias abscisic acid transporter *(ABCG31) & subfamily ABCG transporter 0.03 Orthogroups_2024-Update
Brara.F01034.1 No alias subfamily ABCG transporter 0.02 Orthogroups_2024-Update
Brara.F01068.1 No alias subfamily ABCG transporter 0.04 Orthogroups_2024-Update
Brara.K01577.1 No alias subfamily ABCG transporter 0.02 Orthogroups_2024-Update
Glyma.03G168101 No alias pleiotropic drug resistance 12 0.03 Orthogroups_2024-Update
Glyma.13G361900 No alias pleiotropic drug resistance 12 0.03 Orthogroups_2024-Update
Glyma.19G169200 No alias pleiotropic drug resistance 12 0.03 Orthogroups_2024-Update
HORVU3Hr1G053380.1 No alias subfamily ABCG transporter 0.04 Orthogroups_2024-Update
LOC_Os09g16290 No alias ABC-2 type transporter, putative, expressed 0.02 Orthogroups_2024-Update
MA_12965g0010 No alias (q949g3|pdr1_nicpl : 544.0) Pleiotropic drug resistance... 0.03 Orthogroups_2024-Update
MA_249533g0010 No alias (at2g29940 : 311.0) pleiotropic drug resistance 3... 0.03 Orthogroups_2024-Update
PSME_00010410-RA No alias (q8gu88|pdr7_orysa : 1693.0) Putative pleiotropic drug... 0.03 Orthogroups_2024-Update
Potri.010G153700 No alias pleiotropic drug resistance 9 0.03 Orthogroups_2024-Update
Potri.018G074500 No alias pleiotropic drug resistance 4 0.02 Orthogroups_2024-Update
Pp1s375_55V6 No alias atp-binding cassette 0.03 Orthogroups_2024-Update
Seita.1G041000.1 No alias subfamily ABCG transporter 0.03 Orthogroups_2024-Update
Sobic.003G216300.1 No alias subfamily ABCG transporter 0.03 Orthogroups_2024-Update
Sobic.004G254100.1 No alias subfamily ABCG transporter 0.03 Orthogroups_2024-Update
Solyc02g081870 No alias Pleiotropic drug resistance ABC transporter (AHRD V3.3... 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA InterProScan predictions
CC GO:0016020 membrane IEA InterProScan predictions
MF GO:0016887 ATPase activity IEA InterProScan predictions
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Type GO Term Name Evidence Source
CC GO:0005643 nuclear pore IEP Predicted GO
BP GO:0006913 nucleocytoplasmic transport IEP Predicted GO
BP GO:0009719 response to endogenous stimulus IEP Predicted GO
BP GO:0009725 response to hormone IEP Predicted GO
BP GO:0009733 response to auxin IEP Predicted GO
BP GO:0010033 response to organic substance IEP Predicted GO
MF GO:0017056 structural constituent of nuclear pore IEP Predicted GO
MF GO:0020037 heme binding IEP Predicted GO
BP GO:0042221 response to chemical IEP Predicted GO
CC GO:0044428 nuclear part IEP Predicted GO
MF GO:0046906 tetrapyrrole binding IEP Predicted GO
MF GO:0046983 protein dimerization activity IEP Predicted GO
BP GO:0050896 response to stimulus IEP Predicted GO
BP GO:0051169 nuclear transport IEP Predicted GO
InterPro domains Description Start Stop
IPR013581 PDR_assoc 626 690
IPR003439 ABC_transporter-like 167 349
IPR003439 ABC_transporter-like 779 931
IPR013525 ABC_2_trans 435 621
IPR013525 ABC_2_trans 1077 1289
IPR003959 ATPase_AAA_core 1600 1653
IPR029481 ABC_trans_N 91 142
No external refs found!