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  5. Solyc01g005370

Solyc01g005370


Description : EF hand calcium-binding family protein (AHRD V3.3 *** G8A011_MEDTR)


Gene families : OG_42_0000644 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000644_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Solyc01g005370
Cluster HCCA clusters: Cluster_33

Target Alias Description ECC score Gene Family Method Actions
At3g03400 No alias Probable calcium-binding protein CML33... 0.06 Orthogroups_2024-Update
LOC_Os05g31620 No alias OsCML15 - Calmodulin-related calcium sensor protein, expressed 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005509 calcium ion binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
BP GO:0006644 phospholipid metabolic process IEP Predicted GO
BP GO:0006650 glycerophospholipid metabolic process IEP Predicted GO
MF GO:0015095 magnesium ion transmembrane transporter activity IEP Predicted GO
BP GO:0015693 magnesium ion transport IEP Predicted GO
MF GO:0016307 phosphatidylinositol phosphate kinase activity IEP Predicted GO
MF GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen IEP Predicted GO
BP GO:0046486 glycerolipid metabolic process IEP Predicted GO
BP GO:0046488 phosphatidylinositol metabolic process IEP Predicted GO
MF GO:0051213 dioxygenase activity IEP Predicted GO
BP GO:0070838 divalent metal ion transport IEP Predicted GO
BP GO:0072511 divalent inorganic cation transport IEP Predicted GO
InterPro domains Description Start Stop
IPR002048 EF_hand_dom 31 92
IPR002048 EF_hand_dom 105 167
No external refs found!