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  5. Solyc01g008810

Solyc01g008810


Description : RING/U-box superfamily protein (AHRD V3.3 *** AT5G19430.6)


Gene families : OG_42_0004930 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0004930_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Solyc01g008810
Cluster HCCA clusters: Cluster_80


Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA InterProScan predictions
MF GO:0008270 zinc ion binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
BP GO:0000160 phosphorelay signal transduction system IEP Predicted GO
CC GO:0000347 THO complex IEP Predicted GO
BP GO:0000375 RNA splicing, via transesterification reactions IEP Predicted GO
BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP Predicted GO
BP GO:0000398 mRNA splicing, via spliceosome IEP Predicted GO
CC GO:0000445 THO complex part of transcription export complex IEP Predicted GO
MF GO:0005096 GTPase activator activity IEP Predicted GO
CC GO:0005681 spliceosomal complex IEP Predicted GO
BP GO:0006397 mRNA processing IEP Predicted GO
MF GO:0008047 enzyme activator activity IEP Predicted GO
BP GO:0008380 RNA splicing IEP Predicted GO
BP GO:0016071 mRNA metabolic process IEP Predicted GO
BP GO:0035556 intracellular signal transduction IEP Predicted GO
CC GO:0044428 nuclear part IEP Predicted GO
InterPro domains Description Start Stop
IPR001841 Znf_RING 48 92
No external refs found!