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  5. Sopen01g030920

Sopen01g030920


Description : HCO3- transporter family


Gene families : OG_42_0000732 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000732_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Sopen01g030920
Cluster HCCA clusters: Cluster_15

Target Alias Description ECC score Gene Family Method Actions
A4A49_19376 No alias boron transporter 1 0.06 Orthogroups_2024-Update
Brara.D02830.1 No alias borate transporter *(BOR) 0.03 Orthogroups_2024-Update
Brara.E00075.1 No alias borate transporter *(BOR) 0.03 Orthogroups_2024-Update
Glyma.04G184000 No alias HCO3- transporter family 0.02 Orthogroups_2024-Update
Glyma.09G031400 No alias HCO3- transporter family 0.02 Orthogroups_2024-Update
Glyma.17G088800 No alias HCO3- transporter family 0.04 Orthogroups_2024-Update
Glyma.19G219500 No alias HCO3- transporter family 0.06 Orthogroups_2024-Update
LOC_Os01g08020 No alias boron transporter protein, putative, expressed 0.04 Orthogroups_2024-Update
LOC_Os12g37840 No alias boron transporter protein, putative, expressed 0.03 Orthogroups_2024-Update
PSME_00011316-RA No alias (at3g62270 : 780.0) HCO3- transporter family; FUNCTIONS... 0.02 Orthogroups_2024-Update
Seita.5G124100.1 No alias borate transporter *(BOR) 0.03 Orthogroups_2024-Update
Solyc01g079150 No alias Boron transporter (AHRD V3.3 *** B6V758_VITVI) 0.14 Orthogroups_2024-Update
Solyc03g120020 No alias Boron transporter, putative (AHRD V3.3 *** A0A061G9M0_THECC) 0.09 Orthogroups_2024-Update

Type GO Term Name Evidence Source
BP GO:0006820 anion transport IEA InterProScan predictions
CC GO:0016021 integral component of membrane IEA InterProScan predictions
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR011531 HCO3_transpt_C 202 372
IPR011531 HCO3_transpt_C 460 550
IPR011531 HCO3_transpt_C 2 180
No external refs found!