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  5. Sopen01g030950

Sopen01g030950


Description : Pectinesterase


Gene families : OG_42_0000087 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000087_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Sopen01g030950
Cluster HCCA clusters: Cluster_94

Target Alias Description ECC score Gene Family Method Actions
A4A49_15905 No alias putative pectinesterase 8 0.04 Orthogroups_2024-Update
A4A49_27669 No alias pectinesterase 2 0.02 Orthogroups_2024-Update
At2g21610 No alias Pectinesterase 11 [Source:UniProtKB/TrEMBL;Acc:A0A1P8AZ45] 0.02 Orthogroups_2024-Update
At2g36700 No alias Putative pectinesterase 14... 0.02 Orthogroups_2024-Update
At3g24130 No alias Probable pectinesterase 29... 0.02 Orthogroups_2024-Update
Bradi4g00840 No alias Pectin lyase-like superfamily protein 0.02 Orthogroups_2024-Update
Brara.F02821.1 No alias pectin methylesterase 0.02 Orthogroups_2024-Update
Brara.I05452.1 No alias pectin methylesterase 0.05 Orthogroups_2024-Update
Brara.J01617.1 No alias pectin methylesterase 0.02 Orthogroups_2024-Update
GRMZM2G070913 No alias pectinesterase 11 0.04 Orthogroups_2024-Update
Glyma.17G141700 No alias Pectin lyase-like superfamily protein 0.03 Orthogroups_2024-Update
Mp3g01170.1 No alias pectin methylesterase 0.02 Orthogroups_2024-Update
PSME_00045911-RA No alias (at5g19730 : 469.0) Pectin lyase-like superfamily... 0.03 Orthogroups_2024-Update
PSME_00045931-RA No alias (at5g47500 : 448.0) Pectin lyase-like superfamily... 0.03 Orthogroups_2024-Update
Potri.007G015700 No alias Pectin lyase-like superfamily protein 0.03 Orthogroups_2024-Update
Potri.013G008100 No alias Pectin lyase-like superfamily protein 0.02 Orthogroups_2024-Update
Potri.016G017700 No alias Pectin lyase-like superfamily protein 0.03 Orthogroups_2024-Update
Potri.018G068400 No alias Pectin lyase-like superfamily protein 0.03 Orthogroups_2024-Update
Pp1s175_19V6 No alias pectin methylesterase 0.02 Orthogroups_2024-Update
Pp1s3_508V6 No alias pectinesterase ppe8b 0.03 Orthogroups_2024-Update
Pp1s461_15V6 No alias pectin methylesterase 0.02 Orthogroups_2024-Update
Pp1s67_157V6 No alias pectin methylesterase 0.02 Orthogroups_2024-Update
Seita.8G237600.1 No alias pectin methylesterase 0.02 Orthogroups_2024-Update
Sobic.002G138400.1 No alias pectin methylesterase 0.02 Orthogroups_2024-Update
Sobic.002G370300.1 No alias pectin methylesterase 0.03 Orthogroups_2024-Update
Sobic.003G231500.1 No alias pectin methylesterase 0.02 Orthogroups_2024-Update
Sobic.005G217101.1 No alias pectin methylesterase 0.03 Orthogroups_2024-Update
Solyc09g091730 No alias Pectinesterase (AHRD V3.3 *** K4CWJ9_SOLLC) 0.04 Orthogroups_2024-Update
Sopen07g022810 No alias Pectinesterase 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0030599 pectinesterase activity IEA InterProScan predictions
BP GO:0042545 cell wall modification IEA InterProScan predictions
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR000070 Pectinesterase_cat 36 327
No external refs found!