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  5. 58368

58368


Description : Translation elongation factor EF1B/ribosomal protein S6 family protein


Gene families : OG_42_0007385 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0007385_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Selaginella: 58368
Cluster HCCA clusters: Cluster_100

Target Alias Description ECC score Gene Family Method Actions
A4A49_03704 No alias 30s ribosomal protein s6 alpha, chloroplastic 0.04 Orthogroups_2024-Update
A4A49_12743 No alias 30s ribosomal protein s6 alpha, chloroplastic 0.06 Orthogroups_2024-Update
Bradi1g02030 No alias Translation elongation factor EF1B/ribosomal protein S6... 0.04 Orthogroups_2024-Update
Brara.I01293.1 No alias component *(uS6c) of small plastid ribosomal-subunit proteome 0.07 Orthogroups_2024-Update
Cre12.g520600 No alias Translation elongation factor EF1B/ribosomal protein S6... 0.04 Orthogroups_2024-Update
GRMZM2G118005 No alias Translation elongation factor EF1B/ribosomal protein S6... 0.02 Orthogroups_2024-Update
HORVU5Hr1G120250.1 No alias component *(uS6c) of small plastid ribosomal-subunit proteome 0.05 Orthogroups_2024-Update
Kfl00077_0230 kfl00077_0230_v1.1 (p82403|rr6_spiol : 125.0) 30S ribosomal protein S6... 0.04 Orthogroups_2024-Update
Potri.001G088300 No alias Translation elongation factor EF1B/ribosomal protein S6... 0.02 Orthogroups_2024-Update
Seita.9G016600.1 No alias component *(uS6c) of small plastid ribosomal-subunit proteome 0.04 Orthogroups_2024-Update
Sobic.001G017000.1 No alias component *(uS6c) of small plastid ribosomal-subunit proteome 0.02 Orthogroups_2024-Update
Solyc08g082690 No alias Ribosomal protein S6 (AHRD V3.3 *** A0A103XFW4_CYNCS) 0.03 Orthogroups_2024-Update
Sopen08g030910 No alias Ribosomal protein S6 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA InterProScan predictions
CC GO:0005840 ribosome IEA InterProScan predictions
BP GO:0006412 translation IEA InterProScan predictions
MF GO:0019843 rRNA binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0003774 motor activity IEP Predicted GO
MF GO:0003777 microtubule motor activity IEP Predicted GO
CC GO:0005622 intracellular IEP Predicted GO
BP GO:0006508 proteolysis IEP Predicted GO
BP GO:0006928 movement of cell or subcellular component IEP Predicted GO
BP GO:0007017 microtubule-based process IEP Predicted GO
BP GO:0007018 microtubule-based movement IEP Predicted GO
BP GO:0007034 vacuolar transport IEP Predicted GO
MF GO:0008017 microtubule binding IEP Predicted GO
MF GO:0008092 cytoskeletal protein binding IEP Predicted GO
MF GO:0008233 peptidase activity IEP Predicted GO
CC GO:0009522 photosystem I IEP Predicted GO
CC GO:0009538 photosystem I reaction center IEP Predicted GO
MF GO:0015631 tubulin binding IEP Predicted GO
BP GO:0015985 energy coupled proton transport, down electrochemical gradient IEP Predicted GO
BP GO:0015986 ATP synthesis coupled proton transport IEP Predicted GO
MF GO:0016787 hydrolase activity IEP Predicted GO
MF GO:0019829 cation-transporting ATPase activity IEP Predicted GO
BP GO:0022613 ribonucleoprotein complex biogenesis IEP Predicted GO
MF GO:0022853 active ion transmembrane transporter activity IEP Predicted GO
CC GO:0033178 proton-transporting two-sector ATPase complex, catalytic domain IEP Predicted GO
BP GO:0042254 ribosome biogenesis IEP Predicted GO
MF GO:0042625 ATPase coupled ion transmembrane transporter activity IEP Predicted GO
MF GO:0044769 ATPase activity, coupled to transmembrane movement of ions, rotational mechanism IEP Predicted GO
CC GO:0045261 proton-transporting ATP synthase complex, catalytic core F(1) IEP Predicted GO
MF GO:0046933 proton-transporting ATP synthase activity, rotational mechanism IEP Predicted GO
CC GO:0098796 membrane protein complex IEP Predicted GO
InterPro domains Description Start Stop
IPR000529 Ribosomal_S6 12 110
No external refs found!