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  5. Solyc01g107730

Solyc01g107730


Description : D-type cyclin-2


Gene families : OG_42_0000136 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000136_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Solyc01g107730
Cluster HCCA clusters: Cluster_266

Target Alias Description ECC score Gene Family Method Actions
Bradi1g24990 No alias Cyclin D6;1 0.02 Orthogroups_2024-Update
Brara.B01898.1 No alias regulatory protein *(CYCD) of cell cycle 0.02 Orthogroups_2024-Update
Brara.H01220.1 No alias regulatory protein *(CYCD) of cell cycle 0.04 Orthogroups_2024-Update
Brara.I00217.1 No alias regulatory protein *(CYCD) of cell cycle 0.02 Orthogroups_2024-Update
Brara.I04584.1 No alias regulatory protein *(CYCD) of cell cycle 0.03 Orthogroups_2024-Update
GRMZM2G140633 No alias CYCLIN D4;1 0.03 Orthogroups_2024-Update
Glyma.01G035600 No alias CYCLIN D1;1 0.02 Orthogroups_2024-Update
Glyma.10G256200 No alias CYCLIN D1;1 0.04 Orthogroups_2024-Update
HORVU6Hr1G077500.1 No alias regulatory protein *(CYCD) of cell cycle 0.03 Orthogroups_2024-Update
Kfl00038_0280 kfl00038_0280_v1.1 no hits & (original description: no original description) 0.03 Orthogroups_2024-Update
Kfl00080_0200 kfl00080_0200_v1.1 (at1g70210 : 131.0) Encodes a D-type cyclin that... 0.01 Orthogroups_2024-Update
Potri.007G055300 No alias cyclin d5;1 0.03 Orthogroups_2024-Update
Solyc11g010460 No alias cyclinD4_1 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
CC GO:0005634 nucleus IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Predicted GO
MF GO:0003676 nucleic acid binding IEP Predicted GO
MF GO:0003677 DNA binding IEP Predicted GO
MF GO:0003924 GTPase activity IEP Predicted GO
MF GO:0004097 catechol oxidase activity IEP Predicted GO
MF GO:0004332 fructose-bisphosphate aldolase activity IEP Predicted GO
MF GO:0004427 inorganic diphosphatase activity IEP Predicted GO
MF GO:0004518 nuclease activity IEP Predicted GO
MF GO:0005488 binding IEP Predicted GO
BP GO:0006139 nucleobase-containing compound metabolic process IEP Predicted GO
BP GO:0006259 DNA metabolic process IEP Predicted GO
BP GO:0006260 DNA replication IEP Predicted GO
BP GO:0006270 DNA replication initiation IEP Predicted GO
BP GO:0006725 cellular aromatic compound metabolic process IEP Predicted GO
BP GO:0007264 small GTPase mediated signal transduction IEP Predicted GO
MF GO:0009678 hydrogen-translocating pyrophosphatase activity IEP Predicted GO
MF GO:0016679 oxidoreductase activity, acting on diphenols and related substances as donors IEP Predicted GO
MF GO:0016682 oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor IEP Predicted GO
MF GO:0016832 aldehyde-lyase activity IEP Predicted GO
BP GO:0035556 intracellular signal transduction IEP Predicted GO
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Predicted GO
MF GO:0036094 small molecule binding IEP Predicted GO
MF GO:0043167 ion binding IEP Predicted GO
BP GO:0044260 cellular macromolecule metabolic process IEP Predicted GO
BP GO:0046483 heterocycle metabolic process IEP Predicted GO
BP GO:0090304 nucleic acid metabolic process IEP Predicted GO
MF GO:0097159 organic cyclic compound binding IEP Predicted GO
MF GO:1901265 nucleoside phosphate binding IEP Predicted GO
BP GO:1901360 organic cyclic compound metabolic process IEP Predicted GO
MF GO:1901363 heterocyclic compound binding IEP Predicted GO
InterPro domains Description Start Stop
IPR006671 Cyclin_N 96 198
IPR004367 Cyclin_C-dom 200 306
No external refs found!