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  5. Sopen01g031280

Sopen01g031280


Description : WD domain, G-beta repeat


Gene families : OG_42_0003953 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0003953_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Sopen01g031280
Cluster HCCA clusters: Cluster_122

Target Alias Description ECC score Gene Family Method Actions
At2g47410 No alias WD40/YVTN repeat-like-containing domain;Bromodomain... 0.05 Orthogroups_2024-Update
Solyc01g060040 No alias Bromodomain and WD repeat-containing protein 1 (AHRD... 0.03 Orthogroups_2024-Update
evm.model.tig00000808.30 No alias (at2g47410 : 137.0) WD40/YVTN repeat-like-containing... 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA InterProScan predictions
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR001680 WD40_repeat 235 272
IPR001680 WD40_repeat 278 313
IPR001680 WD40_repeat 396 427
IPR001680 WD40_repeat 581 620
IPR001680 WD40_repeat 320 359
No external refs found!