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  5. Sopen01g031350

Sopen01g031350


Description : Glycosyl hydrolase family 3 N terminal domain


Gene families : OG_42_0000397 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000397_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Sopen01g031350
Cluster HCCA clusters: Cluster_70

Target Alias Description ECC score Gene Family Method Actions
A4A49_38116 No alias putative beta-d-xylosidase 2 0.04 Orthogroups_2024-Update
At1g02640 No alias Probable beta-D-xylosidase 2... 0.03 Orthogroups_2024-Update
At5g49360 No alias Beta-D-xylosidase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9FGY1] 0.03 Orthogroups_2024-Update
Glyma.06G105300 No alias Glycosyl hydrolase family protein 0.03 Orthogroups_2024-Update
Glyma.09G202900 No alias Glycosyl hydrolase family protein 0.02 Orthogroups_2024-Update
LOC_Os11g19160 No alias beta-D-xylosidase, putative, expressed 0.03 Orthogroups_2024-Update
PSME_00023147-RA No alias (at5g64570 : 870.0) Encodes a beta-d-xylosidase that... 0.02 Orthogroups_2024-Update
Seita.1G323200.1 No alias bifunctional alpha-L-arabinofuranosidase and... 0.03 Orthogroups_2024-Update
Sobic.005G211500.1 No alias bifunctional alpha-L-arabinofuranosidase and... 0.03 Orthogroups_2024-Update
Sobic.006G157700.1 No alias bifunctional alpha-L-arabinofuranosidase and... 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEA InterProScan predictions
BP GO:0005975 carbohydrate metabolic process IEA InterProScan predictions
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR002772 Glyco_hydro_3_C 398 628
IPR001764 Glyco_hydro_3_N 112 353
IPR026891 Fn3-like 693 757
No external refs found!