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  5. 73389

73389


Description : cytidine deaminase 1


Gene families : OG_42_0001694 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001694_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Selaginella: 73389
Cluster HCCA clusters: Cluster_180

Target Alias Description ECC score Gene Family Method Actions
MA_80408g0010 No alias (at2g19570 : 268.0) Encodes a cytidine deaminase that... 0.03 Orthogroups_2024-Update
PSME_00054861-RA No alias no hits & (original description: no original description) 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0004126 cytidine deaminase activity IEA InterProScan predictions
MF GO:0008270 zinc ion binding IEA InterProScan predictions
BP GO:0009972 cytidine deamination IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0004525 ribonuclease III activity IEP Predicted GO
BP GO:0006891 intra-Golgi vesicle-mediated transport IEP Predicted GO
MF GO:0008536 Ran GTPase binding IEP Predicted GO
MF GO:0016891 endoribonuclease activity, producing 5'-phosphomonoesters IEP Predicted GO
MF GO:0016893 endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters IEP Predicted GO
CC GO:0017119 Golgi transport complex IEP Predicted GO
MF GO:0032296 double-stranded RNA-specific ribonuclease activity IEP Predicted GO
CC GO:0099023 tethering complex IEP Predicted GO
InterPro domains Description Start Stop
IPR002125 CMP_dCMP_dom 40 115
IPR013171 Cyd/dCyd_deaminase_Zn-bd 135 281
No external refs found!