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  3. Selaginella moellendorffii
  4. Sequence
  5. 74098

74098


Description : syntaxin of plants 124


Gene families : OG_42_0000336 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000336_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Selaginella: 74098
Cluster HCCA clusters: Cluster_52

Target Alias Description ECC score Gene Family Method Actions
151097 No alias syntaxin of plants 124 0.04 Orthogroups_2024-Update
A4A49_24964 No alias syntaxin-121 0.03 Orthogroups_2024-Update
Bradi1g25036 No alias syntaxin of plants 131 0.03 Orthogroups_2024-Update
Bradi3g07970 No alias syntaxin of plants 124 0.04 Orthogroups_2024-Update
Brara.E03504.1 No alias Qa-type SYP1-group component of SNARE membrane fusion complex 0.02 Orthogroups_2024-Update
GRMZM2G029270 No alias syntaxin of plants 124 0.03 Orthogroups_2024-Update
GRMZM2G414540 No alias syntaxin of plants 121 0.02 Orthogroups_2024-Update
Glyma.02G195400 No alias syntaxin of plants 121 0.02 Orthogroups_2024-Update
HORVU2Hr1G043130.15 No alias Qa-type SYP1-group component of SNARE membrane fusion complex 0.03 Orthogroups_2024-Update
HORVU3Hr1G115630.1 No alias Qa-type SYP1-group component of SNARE membrane fusion complex 0.03 Orthogroups_2024-Update
LOC_Os06g07200 No alias syntaxin, putative, expressed 0.02 Orthogroups_2024-Update
MA_28961g0010 No alias (at1g11250 : 290.0) member of SYP12 Gene Family;... 0.03 Orthogroups_2024-Update
Mp6g00050.1 No alias SYP1-group Qa-type SNARE component 0.02 Orthogroups_2024-Update
Mp7g13190.1 No alias SYP1-group Qa-type SNARE component 0.02 Orthogroups_2024-Update
PSME_00055228-RA No alias (at4g33990 : 129.0) embryo defective 2758 (EMB2758);... 0.02 Orthogroups_2024-Update
Potri.004G035400 No alias syntaxin of plants 124 0.04 Orthogroups_2024-Update
Potri.016G068600 No alias syntaxin of plants 121 0.03 Orthogroups_2024-Update
Seita.1G039700.1 No alias Qa-type SYP1-group component of SNARE membrane fusion complex 0.02 Orthogroups_2024-Update
Seita.3G347200.1 No alias Qa-type SYP1-group component of SNARE membrane fusion complex 0.04 Orthogroups_2024-Update
Seita.9G063400.1 No alias Qa-type SYP1-group component of SNARE membrane fusion complex 0.04 Orthogroups_2024-Update
Sobic.001G064900.1 No alias Qa-type SYP1-group component of SNARE membrane fusion complex 0.02 Orthogroups_2024-Update
Solyc01g006950 No alias Syntaxin, putative (AHRD V3.3 *** B9SDJ9_RICCO) 0.05 Orthogroups_2024-Update
Solyc10g081850 No alias Syntaxin, putative (AHRD V3.3 *** B9SDJ9_RICCO) 0.02 Orthogroups_2024-Update
Sopen10g032370 No alias SNARE domain 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP Predicted GO
MF GO:0003700 DNA-binding transcription factor activity IEP Predicted GO
MF GO:0003824 catalytic activity IEP Predicted GO
MF GO:0003950 NAD+ ADP-ribosyltransferase activity IEP Predicted GO
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Predicted GO
MF GO:0004568 chitinase activity IEP Predicted GO
MF GO:0005488 binding IEP Predicted GO
MF GO:0005506 iron ion binding IEP Predicted GO
BP GO:0006022 aminoglycan metabolic process IEP Predicted GO
BP GO:0006026 aminoglycan catabolic process IEP Predicted GO
BP GO:0006030 chitin metabolic process IEP Predicted GO
BP GO:0006032 chitin catabolic process IEP Predicted GO
BP GO:0006040 amino sugar metabolic process IEP Predicted GO
BP GO:0006355 regulation of transcription, DNA-templated IEP Predicted GO
BP GO:0006950 response to stress IEP Predicted GO
MF GO:0008061 chitin binding IEP Predicted GO
BP GO:0008150 biological_process IEP Predicted GO
BP GO:0008152 metabolic process IEP Predicted GO
BP GO:0008272 sulfate transport IEP Predicted GO
BP GO:0009056 catabolic process IEP Predicted GO
BP GO:0009057 macromolecule catabolic process IEP Predicted GO
BP GO:0009405 pathogenesis IEP Predicted GO
BP GO:0009889 regulation of biosynthetic process IEP Predicted GO
MF GO:0009916 alternative oxidase activity IEP Predicted GO
BP GO:0010468 regulation of gene expression IEP Predicted GO
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Predicted GO
MF GO:0015103 inorganic anion transmembrane transporter activity IEP Predicted GO
MF GO:0015116 sulfate transmembrane transporter activity IEP Predicted GO
MF GO:0016491 oxidoreductase activity IEP Predicted GO
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP Predicted GO
MF GO:0016763 transferase activity, transferring pentosyl groups IEP Predicted GO
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Predicted GO
BP GO:0016998 cell wall macromolecule catabolic process IEP Predicted GO
BP GO:0017144 drug metabolic process IEP Predicted GO
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Predicted GO
BP GO:0019222 regulation of metabolic process IEP Predicted GO
MF GO:0020037 heme binding IEP Predicted GO
BP GO:0031323 regulation of cellular metabolic process IEP Predicted GO
BP GO:0031326 regulation of cellular biosynthetic process IEP Predicted GO
BP GO:0042737 drug catabolic process IEP Predicted GO
MF GO:0043167 ion binding IEP Predicted GO
MF GO:0043169 cation binding IEP Predicted GO
BP GO:0044036 cell wall macromolecule metabolic process IEP Predicted GO
BP GO:0044248 cellular catabolic process IEP Predicted GO
MF GO:0045735 nutrient reservoir activity IEP Predicted GO
BP GO:0046348 amino sugar catabolic process IEP Predicted GO
MF GO:0046872 metal ion binding IEP Predicted GO
MF GO:0046906 tetrapyrrole binding IEP Predicted GO
MF GO:0046914 transition metal ion binding IEP Predicted GO
MF GO:0048037 cofactor binding IEP Predicted GO
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Predicted GO
BP GO:0051252 regulation of RNA metabolic process IEP Predicted GO
BP GO:0055114 oxidation-reduction process IEP Predicted GO
BP GO:0060255 regulation of macromolecule metabolic process IEP Predicted GO
BP GO:0072348 sulfur compound transport IEP Predicted GO
BP GO:0080090 regulation of primary metabolic process IEP Predicted GO
MF GO:0097159 organic cyclic compound binding IEP Predicted GO
MF GO:0140110 transcription regulator activity IEP Predicted GO
BP GO:1901071 glucosamine-containing compound metabolic process IEP Predicted GO
BP GO:1901072 glucosamine-containing compound catabolic process IEP Predicted GO
BP GO:1901135 carbohydrate derivative metabolic process IEP Predicted GO
BP GO:1901136 carbohydrate derivative catabolic process IEP Predicted GO
MF GO:1901363 heterocyclic compound binding IEP Predicted GO
BP GO:1901565 organonitrogen compound catabolic process IEP Predicted GO
BP GO:1901575 organic substance catabolic process IEP Predicted GO
MF GO:1901682 sulfur compound transmembrane transporter activity IEP Predicted GO
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Predicted GO
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Predicted GO
BP GO:2001141 regulation of RNA biosynthetic process IEP Predicted GO
InterPro domains Description Start Stop
IPR000727 T_SNARE_dom 240 291
IPR006011 Syntaxin_N 35 238
No external refs found!