Description : Tetratricopeptide repeat (TPR)-like superfamily protein
Gene families : OG_42_0000001 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | Selaginella: 74842 | |
Cluster | HCCA clusters: Cluster_104 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
At1g16480 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein... | 0.03 | Orthogroups_2024-Update | |
At4g25270 | No alias | Pentatricopeptide repeat-containing protein At4g25270,... | 0.03 | Orthogroups_2024-Update | |
Glyma.04G203500 | No alias | Pentatricopeptide repeat (PPR) superfamily protein | 0.02 | Orthogroups_2024-Update | |
Glyma.09G088000 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.02 | Orthogroups_2024-Update | |
Glyma.18G288100 | No alias | Pentatricopeptide repeat (PPR) superfamily protein | 0.02 | Orthogroups_2024-Update | |
LOC_Os03g13230 | No alias | pentatricopeptide, putative, expressed | 0.02 | Orthogroups_2024-Update | |
LOC_Os07g39090 | No alias | pentatricopeptide repeat domain containing protein,... | 0.01 | Orthogroups_2024-Update | |
MA_17949g0010 | No alias | (at3g57430 : 648.0) Encodes a chloroplast RNA editing... | 0.03 | Orthogroups_2024-Update | |
PSME_00056375-RA | No alias | (at1g11290 : 677.0) Pentatricopeptide Repeat Protein... | 0.02 | Orthogroups_2024-Update | |
Potri.001G100600 | No alias | Pentatricopeptide repeat (PPR) superfamily protein | 0.02 | Orthogroups_2024-Update | |
Potri.005G187800 | No alias | Pentatricopeptide repeat (PPR) superfamily protein | 0.02 | Orthogroups_2024-Update | |
Potri.006G164100 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.02 | Orthogroups_2024-Update | |
Potri.015G018700 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.01 | Orthogroups_2024-Update | |
Solyc04g076330 | No alias | Pentatricopeptide repeat-containing protein (AHRD V3.3... | 0.02 | Orthogroups_2024-Update | |
Solyc06g076900 | No alias | Pentatricopeptide repeat-containing family protein (AHRD... | 0.01 | Orthogroups_2024-Update | |
Solyc11g067210 | No alias | Pentatricopeptide repeat-containing protein (AHRD V3.3... | 0.01 | Orthogroups_2024-Update | |
Sopen01g038630 | No alias | PPR repeat | 0.02 | Orthogroups_2024-Update | |
Sopen02g018640 | No alias | PPR repeat family | 0.02 | Orthogroups_2024-Update | |
Sopen09g022760 | No alias | PPR repeat | 0.01 | Orthogroups_2024-Update | |
Sopen09g031050 | No alias | PPR repeat | 0.01 | Orthogroups_2024-Update | |
Sopen11g003140 | No alias | PPR repeat family | 0.02 | Orthogroups_2024-Update | |
Sopen11g024970 | No alias | PPR repeat family | 0.02 | Orthogroups_2024-Update | |
Sopen11g029050 | No alias | PPR repeat family | 0.01 | Orthogroups_2024-Update | |
Sopen12g002530 | No alias | PPR repeat | 0.01 | Orthogroups_2024-Update | |
Sopen12g032510 | No alias | PPR repeat family | 0.03 | Orthogroups_2024-Update | |
evm.model.contig_4456.11 | No alias | (at5g61990 : 169.0) Pentatricopeptide repeat (PPR)... | 0.02 | Orthogroups_2024-Update |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0008270 | zinc ion binding | IEA | InterProScan predictions |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
BP | GO:0006644 | phospholipid metabolic process | IEP | Predicted GO |
BP | GO:0008610 | lipid biosynthetic process | IEP | Predicted GO |
BP | GO:0008654 | phospholipid biosynthetic process | IEP | Predicted GO |
MF | GO:0016779 | nucleotidyltransferase activity | IEP | Predicted GO |
MF | GO:0016780 | phosphotransferase activity, for other substituted phosphate groups | IEP | Predicted GO |
BP | GO:0030001 | metal ion transport | IEP | Predicted GO |
MF | GO:0034061 | DNA polymerase activity | IEP | Predicted GO |
MF | GO:0140097 | catalytic activity, acting on DNA | IEP | Predicted GO |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR032867 | DYW_dom | 771 | 892 |
IPR002885 | Pentatricopeptide_repeat | 362 | 384 |
IPR002885 | Pentatricopeptide_repeat | 264 | 288 |
IPR002885 | Pentatricopeptide_repeat | 737 | 766 |
IPR002885 | Pentatricopeptide_repeat | 194 | 224 |
IPR002885 | Pentatricopeptide_repeat | 167 | 191 |
IPR002885 | Pentatricopeptide_repeat | 570 | 591 |
IPR002885 | Pentatricopeptide_repeat | 290 | 328 |
IPR002885 | Pentatricopeptide_repeat | 387 | 434 |
IPR002885 | Pentatricopeptide_repeat | 92 | 140 |
IPR002885 | Pentatricopeptide_repeat | 495 | 542 |
IPR002885 | Pentatricopeptide_repeat | 597 | 644 |
No external refs found! |