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  5. 75487

75487


Description : RNI-like superfamily protein


Gene families : OG_42_0000339 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000339_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Selaginella: 75487
Cluster HCCA clusters: Cluster_5

Target Alias Description ECC score Gene Family Method Actions
At2g39940 No alias Coronatine-insensitive protein 1... 0.03 Orthogroups_2024-Update
At4g03190 No alias GRR1-like protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZR12] 0.03 Orthogroups_2024-Update
Brara.C02040.1 No alias component *(COI) of jasmonic acid receptor complex 0.04 Orthogroups_2024-Update
Brara.D02421.1 No alias component *(COI) of jasmonic acid receptor complex 0.02 Orthogroups_2024-Update
GRMZM2G024180 No alias RNI-like superfamily protein 0.03 Orthogroups_2024-Update
Glyma.06G095400 No alias auxin F-box protein 5 0.04 Orthogroups_2024-Update
Glyma.19G100200 No alias auxin signaling F-box 3 0.04 Orthogroups_2024-Update
HORVU4Hr1G015730.2 No alias Unknown function 0.02 Orthogroups_2024-Update
LOC_Os05g37690 No alias OsFBL23 - F-box domain and LRR containing protein, expressed 0.02 Orthogroups_2024-Update
PSME_00005246-RA No alias (at3g62980 : 633.0) Encodes an auxin receptor that... 0.05 Orthogroups_2024-Update
PSME_00010803-RA No alias (at2g39940 : 593.0) Encodes a protein containing... 0.03 Orthogroups_2024-Update
PSME_00024313-RA No alias (at5g49980 : 738.0) auxin F-box protein 5 (AFB5);... 0.03 Orthogroups_2024-Update
PSME_00027400-RA No alias (at2g39940 : 611.0) Encodes a protein containing... 0.02 Orthogroups_2024-Update
Pp1s12_347V6 No alias coronitine insensitive 1 0.04 Orthogroups_2024-Update
Sobic.003G359600.1 No alias component *(COI) of jasmonic acid receptor complex 0.04 Orthogroups_2024-Update
Solyc06g008470 No alias Protein TRANSPORT INHIBITOR RESPONSE 1 (AHRD V3.3 *-* TIR1_ARATH) 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000786 nucleosome IEP Predicted GO
MF GO:0003830 beta-1,4-mannosylglycoprotein 4-beta-N-acetylglucosaminyltransferase activity IEP Predicted GO
MF GO:0003885 D-arabinono-1,4-lactone oxidase activity IEP Predicted GO
CC GO:0005634 nucleus IEP Predicted GO
BP GO:0006325 chromatin organization IEP Predicted GO
BP GO:0006334 nucleosome assembly IEP Predicted GO
BP GO:0006487 protein N-linked glycosylation IEP Predicted GO
MF GO:0008375 acetylglucosaminyltransferase activity IEP Predicted GO
CC GO:0016020 membrane IEP Predicted GO
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP Predicted GO
MF GO:0016757 transferase activity, transferring glycosyl groups IEP Predicted GO
MF GO:0016758 transferase activity, transferring hexosyl groups IEP Predicted GO
MF GO:0016899 oxidoreductase activity, acting on the CH-OH group of donors, oxygen as acceptor IEP Predicted GO
CC GO:0032993 protein-DNA complex IEP Predicted GO
BP GO:0034728 nucleosome organization IEP Predicted GO
CC GO:0044815 DNA packaging complex IEP Predicted GO
MF GO:0050660 flavin adenine dinucleotide binding IEP Predicted GO
BP GO:0065004 protein-DNA complex assembly IEP Predicted GO
BP GO:0071824 protein-DNA complex subunit organization IEP Predicted GO
MF GO:0140103 catalytic activity, acting on a glycoprotein IEP Predicted GO

No InterPro domains available for this sequence

No external refs found!