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  5. Sopen01g032250

Sopen01g032250


Description : PPR repeat family


Gene families : OG_42_0009855 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0009855_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Sopen01g032250
Cluster HCCA clusters: Cluster_107

Target Alias Description ECC score Gene Family Method Actions
At1g16830 No alias Putative pentatricopeptide repeat-containing protein... 0.02 Orthogroups_2024-Update
Seita.3G276400.1 No alias Unknown function 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 237 262
IPR002885 Pentatricopeptide_repeat 477 498
IPR002885 Pentatricopeptide_repeat 508 555
IPR002885 Pentatricopeptide_repeat 334 382
IPR002885 Pentatricopeptide_repeat 268 311
IPR002885 Pentatricopeptide_repeat 401 450
No external refs found!