Sopen01g032250


Description : PPR repeat family


Gene families : OG_42_0009855 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0009855_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Sopen01g032250
Cluster HCCA clusters: Cluster_107

Target Alias Description ECC score Gene Family Method Actions
At1g16830 No alias Putative pentatricopeptide repeat-containing protein... 0.02 Orthogroups_2024-Update
Seita.3G276400.1 No alias Unknown function 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 237 262
IPR002885 Pentatricopeptide_repeat 477 498
IPR002885 Pentatricopeptide_repeat 508 555
IPR002885 Pentatricopeptide_repeat 334 382
IPR002885 Pentatricopeptide_repeat 268 311
IPR002885 Pentatricopeptide_repeat 401 450
No external refs found!