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  5. 7665

7665


Description : Ribosomal protein L13 family protein


Gene families : OG_42_0005662 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0005662_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Selaginella: 7665
Cluster HCCA clusters: Cluster_210

Target Alias Description ECC score Gene Family Method Actions
A4A49_20292 No alias 50s ribosomal protein l13, chloroplastic 0.02 Orthogroups_2024-Update
Bradi2g49850 No alias Ribosomal protein L13 family protein 0.04 Orthogroups_2024-Update
Brara.B02333.1 No alias component *(uL13c) of large plastid ribosomal-subunit proteome 0.03 Orthogroups_2024-Update
Brara.G03600.1 No alias component *(uL13c) of large plastid ribosomal-subunit proteome 0.04 Orthogroups_2024-Update
Cre06.g264350 No alias Ribosomal protein L13 family protein 0.03 Orthogroups_2024-Update
HORVU3Hr1G071530.1 No alias component *(uL13c) of large plastid ribosomal-subunit proteome 0.06 Orthogroups_2024-Update
Kfl00255_0080 kfl00255_0080_v1.1 (at1g78630 : 240.0) embryo defective 1473 (emb1473);... 0.02 Orthogroups_2024-Update
LOC_Os01g54540 No alias ribosomal protein L13, putative, expressed 0.02 Orthogroups_2024-Update
MA_10433400g0010 No alias (at1g78630 : 164.0) embryo defective 1473 (emb1473);... 0.03 Orthogroups_2024-Update
Potri.011G106100 No alias Ribosomal protein L13 family protein 0.02 Orthogroups_2024-Update
Pp1s365_36V6 No alias ribosomal protein l13 0.02 Orthogroups_2024-Update
Seita.5G318200.1 No alias component *(uL13c) of large plastid ribosomal-subunit proteome 0.05 Orthogroups_2024-Update
Sobic.003G295800.1 No alias component *(uL13c) of large plastid ribosomal-subunit proteome 0.02 Orthogroups_2024-Update
evm.model.tig00020912.24 No alias (at1g78630 : 99.8) embryo defective 1473 (emb1473);... 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA InterProScan predictions
CC GO:0005840 ribosome IEA InterProScan predictions
BP GO:0006412 translation IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0004109 coproporphyrinogen oxidase activity IEP Predicted GO
MF GO:0004418 hydroxymethylbilane synthase activity IEP Predicted GO
MF GO:0004497 monooxygenase activity IEP Predicted GO
MF GO:0004655 porphobilinogen synthase activity IEP Predicted GO
MF GO:0004852 uroporphyrinogen-III synthase activity IEP Predicted GO
MF GO:0004853 uroporphyrinogen decarboxylase activity IEP Predicted GO
CC GO:0005576 extracellular region IEP Predicted GO
CC GO:0005618 cell wall IEP Predicted GO
CC GO:0005622 intracellular IEP Predicted GO
BP GO:0006725 cellular aromatic compound metabolic process IEP Predicted GO
BP GO:0006778 porphyrin-containing compound metabolic process IEP Predicted GO
BP GO:0006779 porphyrin-containing compound biosynthetic process IEP Predicted GO
MF GO:0010277 chlorophyllide a oxygenase [overall] activity IEP Predicted GO
BP GO:0015985 energy coupled proton transport, down electrochemical gradient IEP Predicted GO
BP GO:0015986 ATP synthesis coupled proton transport IEP Predicted GO
MF GO:0016491 oxidoreductase activity IEP Predicted GO
MF GO:0016634 oxidoreductase activity, acting on the CH-CH group of donors, oxygen as acceptor IEP Predicted GO
MF GO:0016703 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of one atom of oxygen (internal monooxygenases or internal mixed function oxidases) IEP Predicted GO
MF GO:0016762 xyloglucan:xyloglucosyl transferase activity IEP Predicted GO
MF GO:0016829 lyase activity IEP Predicted GO
MF GO:0016835 carbon-oxygen lyase activity IEP Predicted GO
MF GO:0016836 hydro-lyase activity IEP Predicted GO
BP GO:0018130 heterocycle biosynthetic process IEP Predicted GO
BP GO:0019438 aromatic compound biosynthetic process IEP Predicted GO
MF GO:0019829 cation-transporting ATPase activity IEP Predicted GO
BP GO:0022613 ribonucleoprotein complex biogenesis IEP Predicted GO
MF GO:0022853 active ion transmembrane transporter activity IEP Predicted GO
CC GO:0030312 external encapsulating structure IEP Predicted GO
BP GO:0033013 tetrapyrrole metabolic process IEP Predicted GO
BP GO:0033014 tetrapyrrole biosynthetic process IEP Predicted GO
CC GO:0033178 proton-transporting two-sector ATPase complex, catalytic domain IEP Predicted GO
BP GO:0042254 ribosome biogenesis IEP Predicted GO
MF GO:0042625 ATPase coupled ion transmembrane transporter activity IEP Predicted GO
MF GO:0044769 ATPase activity, coupled to transmembrane movement of ions, rotational mechanism IEP Predicted GO
CC GO:0045261 proton-transporting ATP synthase complex, catalytic core F(1) IEP Predicted GO
BP GO:0046483 heterocycle metabolic process IEP Predicted GO
MF GO:0046933 proton-transporting ATP synthase activity, rotational mechanism IEP Predicted GO
CC GO:0048046 apoplast IEP Predicted GO
BP GO:0051186 cofactor metabolic process IEP Predicted GO
BP GO:0051188 cofactor biosynthetic process IEP Predicted GO
MF GO:0051537 2 iron, 2 sulfur cluster binding IEP Predicted GO
BP GO:0055114 oxidation-reduction process IEP Predicted GO
MF GO:0070402 NADPH binding IEP Predicted GO
BP GO:1901360 organic cyclic compound metabolic process IEP Predicted GO
BP GO:1901362 organic cyclic compound biosynthetic process IEP Predicted GO
InterPro domains Description Start Stop
IPR005822 Ribosomal_L13 4 128
No external refs found!