Sopen01g032440


Description : ABC transporter transmembrane region


Gene families : OG_42_0000076 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000076_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Sopen01g032440
Cluster HCCA clusters: Cluster_130

Target Alias Description ECC score Gene Family Method Actions
163776 No alias multidrug resistance-associated protein 5 0.02 Orthogroups_2024-Update
165716 No alias multidrug resistance-associated protein 14 0.01 Orthogroups_2024-Update
A4A49_10435 No alias abc transporter c family member 13 0.03 Orthogroups_2024-Update
A4A49_11075 No alias abc transporter c family member 3 0.02 Orthogroups_2024-Update
A4A49_42365 No alias abc transporter c family member 14 0.04 Orthogroups_2024-Update
At2g47800 No alias ABC transporter C family member 4... 0.04 Orthogroups_2024-Update
Bradi5g19787 No alias multidrug resistance-associated protein 9 0.03 Orthogroups_2024-Update
Brara.E02801.1 No alias subfamily ABCC transporter 0.03 Orthogroups_2024-Update
Brara.G01873.1 No alias subfamily ABCC transporter 0.03 Orthogroups_2024-Update
Brara.I04331.1 No alias subfamily ABCC transporter 0.05 Orthogroups_2024-Update
Glyma.05G145000 No alias multidrug resistance-associated protein 3 0.03 Orthogroups_2024-Update
Glyma.09G044500 No alias multidrug resistance-associated protein 4 0.02 Orthogroups_2024-Update
HORVU3Hr1G085890.2 No alias subfamily ABCC transporter 0.03 Orthogroups_2024-Update
PSME_00023720-RA No alias (at1g30400 : 187.0) glutathione S-conjugate transporting... 0.04 Orthogroups_2024-Update
Potri.002G255800 No alias multidrug resistance-associated protein 5 0.03 Orthogroups_2024-Update
Potri.003G197200 No alias multidrug resistance-associated protein 3 0.02 Orthogroups_2024-Update
Pp1s352_50V6 No alias multidrug resistance protein abc transporter family 0.02 Orthogroups_2024-Update
Seita.4G066400.1 No alias subfamily ABCC transporter 0.02 Orthogroups_2024-Update
Seita.7G043600.1 No alias subfamily ABCC transporter 0.02 Orthogroups_2024-Update
Seita.9G543800.1 No alias subfamily ABCC transporter 0.02 Orthogroups_2024-Update
Sobic.001G413000.2 No alias subfamily ABCC transporter 0.02 Orthogroups_2024-Update
Solyc01g080640 No alias Multidrug resistance protein ABC transporter family... 0.05 Orthogroups_2024-Update
Solyc06g036490 No alias ABC transporter family protein (AHRD V3.3 *** U5FPJ5_POPTR) 0.03 Orthogroups_2024-Update
Solyc09g075020 No alias Multidrug resistance protein ABC transporter family... 0.08 Orthogroups_2024-Update
Solyc11g065710 No alias ABC transporter family protein (AHRD V3.3 *-* U5FPJ5_POPTR) 0.03 Orthogroups_2024-Update
evm.model.contig_4450.11 No alias (at1g04120 : 712.0) encodes a high-affinity inositol... 0.01 Orthogroups_2024-Update
evm.model.tig00020684.9 No alias (at1g30400 : 699.0) glutathione S-conjugate transporting... 0.01 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA InterProScan predictions
CC GO:0016021 integral component of membrane IEA InterProScan predictions
MF GO:0016887 ATPase activity IEA InterProScan predictions
MF GO:0042626 ATPase activity, coupled to transmembrane movement of substances IEA InterProScan predictions
BP GO:0055085 transmembrane transport IEA InterProScan predictions
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR003439 ABC_transporter-like 650 714
IPR011527 ABC1_TM_dom 318 585
No external refs found!