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  4. Sequence
  5. 77588

77588


Description : Tetratricopeptide repeat (TPR)-like superfamily protein


Gene families : OG_42_0000934 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000934_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Selaginella: 77588
Cluster HCCA clusters: Cluster_31

Target Alias Description ECC score Gene Family Method Actions
PSME_00021412-RA No alias (at3g62470 : 474.0) Pentatricopeptide repeat (PPR)... 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003885 D-arabinono-1,4-lactone oxidase activity IEP Predicted GO
MF GO:0004089 carbonate dehydratase activity IEP Predicted GO
MF GO:0004197 cysteine-type endopeptidase activity IEP Predicted GO
MF GO:0004347 glucose-6-phosphate isomerase activity IEP Predicted GO
CC GO:0005741 mitochondrial outer membrane IEP Predicted GO
BP GO:0006094 gluconeogenesis IEP Predicted GO
BP GO:0006772 thiamine metabolic process IEP Predicted GO
MF GO:0008171 O-methyltransferase activity IEP Predicted GO
MF GO:0008234 cysteine-type peptidase activity IEP Predicted GO
BP GO:0009228 thiamine biosynthetic process IEP Predicted GO
MF GO:0015293 symporter activity IEP Predicted GO
MF GO:0016853 isomerase activity IEP Predicted GO
MF GO:0016899 oxidoreductase activity, acting on the CH-OH group of donors, oxygen as acceptor IEP Predicted GO
BP GO:0017144 drug metabolic process IEP Predicted GO
BP GO:0019319 hexose biosynthetic process IEP Predicted GO
CC GO:0019867 outer membrane IEP Predicted GO
CC GO:0019898 extrinsic component of membrane IEP Predicted GO
MF GO:0031072 heat shock protein binding IEP Predicted GO
CC GO:0031966 mitochondrial membrane IEP Predicted GO
CC GO:0031968 organelle outer membrane IEP Predicted GO
BP GO:0042723 thiamine-containing compound metabolic process IEP Predicted GO
BP GO:0042724 thiamine-containing compound biosynthetic process IEP Predicted GO
BP GO:0046364 monosaccharide biosynthetic process IEP Predicted GO
MF GO:0046983 protein dimerization activity IEP Predicted GO
BP GO:0050790 regulation of catalytic activity IEP Predicted GO
BP GO:0065009 regulation of molecular function IEP Predicted GO
BP GO:0072528 pyrimidine-containing compound biosynthetic process IEP Predicted GO
CC GO:0098588 bounding membrane of organelle IEP Predicted GO
CC GO:0098805 whole membrane IEP Predicted GO
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 229 256
IPR002885 Pentatricopeptide_repeat 573 603
IPR002885 Pentatricopeptide_repeat 184 215
IPR002885 Pentatricopeptide_repeat 610 640
IPR002885 Pentatricopeptide_repeat 646 695
IPR002885 Pentatricopeptide_repeat 258 307
IPR002885 Pentatricopeptide_repeat 718 765
IPR002885 Pentatricopeptide_repeat 398 447
IPR002885 Pentatricopeptide_repeat 510 553
IPR002885 Pentatricopeptide_repeat 118 166
IPR002885 Pentatricopeptide_repeat 328 377
No external refs found!