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  5. 77736

77736


Description : Tetratricopeptide repeat (TPR)-like superfamily protein


Gene families : OG_42_0002876 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0002876_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Selaginella: 77736
Cluster HCCA clusters: Cluster_116

Target Alias Description ECC score Gene Family Method Actions
At3g23020 No alias Pentatricopeptide repeat-containing protein At3g23020... 0.03 Orthogroups_2024-Update
Bradi1g28220 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.05 Orthogroups_2024-Update
Glyma.10G193100 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.04 Orthogroups_2024-Update
PSME_00002183-RA No alias (at4g02750 : 512.0) Tetratricopeptide repeat (TPR)-like... 0.03 Orthogroups_2024-Update
Sobic.001G495400.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Solyc07g054480 No alias Pentatricopeptide repeat-containing protein (AHRD V3.3... 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0005543 phospholipid binding IEP Predicted GO
MF GO:0008289 lipid binding IEP Predicted GO
MF GO:0008536 Ran GTPase binding IEP Predicted GO
MF GO:0017016 Ras GTPase binding IEP Predicted GO
MF GO:0019899 enzyme binding IEP Predicted GO
MF GO:0031267 small GTPase binding IEP Predicted GO
MF GO:0035091 phosphatidylinositol binding IEP Predicted GO
MF GO:0051020 GTPase binding IEP Predicted GO
InterPro domains Description Start Stop
IPR033443 PPR_long 453 571
IPR002885 Pentatricopeptide_repeat 148 178
IPR002885 Pentatricopeptide_repeat 298 346
IPR002885 Pentatricopeptide_repeat 231 268
IPR002885 Pentatricopeptide_repeat 372 400
IPR002885 Pentatricopeptide_repeat 406 434
IPR002885 Pentatricopeptide_repeat 683 712
IPR002885 Pentatricopeptide_repeat 580 606
IPR002885 Pentatricopeptide_repeat 615 639
No external refs found!