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  5. Sopen01g032660

Sopen01g032660


Description : Ring finger domain


Gene families : OG_42_0000003 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Sopen01g032660
Cluster HCCA clusters: Cluster_16

Target Alias Description ECC score Gene Family Method Actions
438800 No alias RING/U-box superfamily protein 0.02 Orthogroups_2024-Update
Brara.B02021.1 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase 0.02 Orthogroups_2024-Update
Brara.D02285.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Brara.E00038.1 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase 0.03 Orthogroups_2024-Update
Brara.F02863.1 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase 0.03 Orthogroups_2024-Update
Brara.G00123.1 No alias regulatory E3 ubiquitin ligase targeted to IRT1 *(IDF1) 0.02 Orthogroups_2024-Update
Brara.H00897.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Glyma.07G245400 No alias TOXICOS EN LEVADURA 2 0.02 Orthogroups_2024-Update
Glyma.11G191800 No alias RING/U-box superfamily protein 0.02 Orthogroups_2024-Update
Glyma.12G082550 No alias RING/U-box superfamily protein 0.03 Orthogroups_2024-Update
Glyma.16G194600 No alias RING/U-box superfamily protein 0.04 Orthogroups_2024-Update
Glyma.18G060500 No alias RING/U-box superfamily protein 0.03 Orthogroups_2024-Update
Glyma.19G010400 No alias hypoxia-responsive family protein / zinc finger... 0.03 Orthogroups_2024-Update
HORVU7Hr1G080020.1 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase 0.02 Orthogroups_2024-Update
LOC_Os02g33720 No alias RING-H2 finger protein, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os11g39640 No alias zinc finger, C3HC4 type domain containing protein, expressed 0.02 Orthogroups_2024-Update
MA_8693914g0010 No alias (at5g05280 : 130.0) RING/U-box superfamily protein;... 0.02 Orthogroups_2024-Update
MA_904294g0010 No alias (at1g72310 : 107.0) Encodes a putative RING-H2 zinc... 0.02 Orthogroups_2024-Update
Pp1s185_137V6 No alias zinc finger 0.03 Orthogroups_2024-Update
Pp1s257_3V6 No alias ac009177_16 ring-h2 zinc finger protein atl6 0.02 Orthogroups_2024-Update
Pp1s71_162V6 No alias ring finger 0.02 Orthogroups_2024-Update
Seita.2G087800.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Seita.5G023000.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Sobic.004G063750.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Sobic.005G012100.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Sobic.006G100200.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Sobic.010G157500.1 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase 0.02 Orthogroups_2024-Update
Solyc07g053420 No alias RING/U-box superfamily protein (AHRD V3.3 *** AT2G42360.1) 0.03 Orthogroups_2024-Update
Solyc12g087860 No alias RING/U-box superfamily protein, putative (AHRD V3.3 ***... 0.05 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR001841 Znf_RING 138 181
No external refs found!