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  4. Sequence
  5. 78385

78385


Description : Zinc finger, C3HC4 type (RING finger) family protein


Gene families : OG_42_0000431 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000431_tree

Sequence : coding (download), protein (download)


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Type Description Actions
Neighborhood Selaginella: 78385
Cluster HCCA clusters: Cluster_99

Target Alias Description ECC score Gene Family Method Actions
Bradi3g51530 No alias Zinc finger, C3HC4 type (RING finger) family protein 0.03 Orthogroups_2024-Update
Bradi3g51535 No alias Zinc finger, C3HC4 type (RING finger) family protein 0.02 Orthogroups_2024-Update
Brara.F00835.1 No alias E3 ubiquitin ligase *(RIE1) 0.02 Orthogroups_2024-Update
Glyma.04G071800 No alias RING/U-box superfamily protein 0.02 Orthogroups_2024-Update
Glyma.05G048800 No alias Zinc finger, C3HC4 type (RING finger) family protein 0.02 Orthogroups_2024-Update
Glyma.05G238900 No alias Zinc finger, C3HC4 type (RING finger) family protein 0.02 Orthogroups_2024-Update
LOC_Os02g45240 No alias zinc finger family protein, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os02g50290 No alias RING zinc finger protein, putative, expressed 0.02 Orthogroups_2024-Update
Seita.7G203100.1 No alias E3 ubiquitin ligase *(RIE1) 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003872 6-phosphofructokinase activity IEP Predicted GO
MF GO:0004652 polynucleotide adenylyltransferase activity IEP Predicted GO
MF GO:0004842 ubiquitin-protein transferase activity IEP Predicted GO
MF GO:0005048 signal sequence binding IEP Predicted GO
MF GO:0005244 voltage-gated ion channel activity IEP Predicted GO
MF GO:0005247 voltage-gated chloride channel activity IEP Predicted GO
MF GO:0005253 anion channel activity IEP Predicted GO
MF GO:0005254 chloride channel activity IEP Predicted GO
BP GO:0005975 carbohydrate metabolic process IEP Predicted GO
BP GO:0005985 sucrose metabolic process IEP Predicted GO
BP GO:0005986 sucrose biosynthetic process IEP Predicted GO
BP GO:0006013 mannose metabolic process IEP Predicted GO
BP GO:0006621 protein retention in ER lumen IEP Predicted GO
BP GO:0006821 chloride transport IEP Predicted GO
BP GO:0007186 G protein-coupled receptor signaling pathway IEP Predicted GO
MF GO:0008308 voltage-gated anion channel activity IEP Predicted GO
MF GO:0008443 phosphofructokinase activity IEP Predicted GO
MF GO:0008483 transaminase activity IEP Predicted GO
MF GO:0015108 chloride transmembrane transporter activity IEP Predicted GO
BP GO:0016567 protein ubiquitination IEP Predicted GO
MF GO:0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor IEP Predicted GO
MF GO:0016769 transferase activity, transferring nitrogenous groups IEP Predicted GO
MF GO:0019200 carbohydrate kinase activity IEP Predicted GO
MF GO:0019203 carbohydrate phosphatase activity IEP Predicted GO
MF GO:0019787 ubiquitin-like protein transferase activity IEP Predicted GO
MF GO:0019842 vitamin binding IEP Predicted GO
MF GO:0022832 voltage-gated channel activity IEP Predicted GO
MF GO:0022836 gated channel activity IEP Predicted GO
MF GO:0022839 ion gated channel activity IEP Predicted GO
MF GO:0030976 thiamine pyrophosphate binding IEP Predicted GO
MF GO:0031683 G-protein beta/gamma-subunit complex binding IEP Predicted GO
BP GO:0032446 protein modification by small protein conjugation IEP Predicted GO
BP GO:0032507 maintenance of protein location in cell IEP Predicted GO
BP GO:0035437 maintenance of protein localization in endoplasmic reticulum IEP Predicted GO
MF GO:0036094 small molecule binding IEP Predicted GO
MF GO:0042277 peptide binding IEP Predicted GO
BP GO:0043631 RNA polyadenylation IEP Predicted GO
MF GO:0044877 protein-containing complex binding IEP Predicted GO
BP GO:0045185 maintenance of protein location IEP Predicted GO
MF GO:0046923 ER retention sequence binding IEP Predicted GO
MF GO:0050307 sucrose-phosphate phosphatase activity IEP Predicted GO
MF GO:0050308 sugar-phosphatase activity IEP Predicted GO
MF GO:0050662 coenzyme binding IEP Predicted GO
BP GO:0051235 maintenance of location IEP Predicted GO
MF GO:0051287 NAD binding IEP Predicted GO
BP GO:0051651 maintenance of location in cell IEP Predicted GO
MF GO:0070566 adenylyltransferase activity IEP Predicted GO
BP GO:0070647 protein modification by small protein conjugation or removal IEP Predicted GO
BP GO:0072595 maintenance of protein localization in organelle IEP Predicted GO
InterPro domains Description Start Stop
IPR001841 Znf_RING 310 352
No external refs found!