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  5. 78404

78404


Description : laccase 12


Gene families : OG_42_0000051 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000051_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Selaginella: 78404
Cluster HCCA clusters: Cluster_151

Target Alias Description ECC score Gene Family Method Actions
A4A49_28011 No alias laccase-2 0.02 Orthogroups_2024-Update
Bradi2g23350 No alias laccase 17 0.03 Orthogroups_2024-Update
Brara.B00087.1 No alias EC_1.10 oxidoreductase acting on diphenol or related... 0.03 Orthogroups_2024-Update
PSME_00033093-RA No alias (at2g40370 : 637.0) putative laccase, a member of... 0.02 Orthogroups_2024-Update
Potri.019G088900 No alias laccase 14 0.03 Orthogroups_2024-Update
Sobic.010G268500.1 No alias EC_1.10 oxidoreductase acting on diphenol or related... 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005507 copper ion binding IEA InterProScan predictions
MF GO:0016491 oxidoreductase activity IEA InterProScan predictions
BP GO:0055114 oxidation-reduction process IEA InterProScan predictions
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Type GO Term Name Evidence Source
CC GO:0009507 chloroplast IEP Predicted GO
CC GO:0009536 plastid IEP Predicted GO
MF GO:0046422 violaxanthin de-epoxidase activity IEP Predicted GO
InterPro domains Description Start Stop
IPR001117 Cu-oxidase 176 327
IPR011707 Cu-oxidase_3 50 163
IPR011706 Cu-oxidase_2 435 565
No external refs found!