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Description : Histone superfamily protein
Gene families : OG_42_0000090 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000090_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | Selaginella: 78992 | |
| Cluster | HCCA clusters: Cluster_2 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| A4A49_56508 | No alias | histone h3.2 | 0.03 | Orthogroups_2024-Update | |
| A4A49_57080 | No alias | histone h3.2 | 0.03 | Orthogroups_2024-Update | |
| A4A49_61103 | No alias | histone h3.2 | 0.03 | Orthogroups_2024-Update | |
| Brara.B00354.1 | No alias | histone *(H3) | 0.06 | Orthogroups_2024-Update | |
| Brara.J02314.1 | No alias | histone *(H3) | 0.02 | Orthogroups_2024-Update | |
| Cre06.g274000 | No alias | Histone superfamily protein | 0.02 | Orthogroups_2024-Update | |
| Cre06.g276850 | No alias | Histone superfamily protein | 0.02 | Orthogroups_2024-Update | |
| Cre12.g504650 | No alias | Histone superfamily protein | 0.01 | Orthogroups_2024-Update | |
| Cre12.g506300 | No alias | Histone superfamily protein | 0.01 | Orthogroups_2024-Update | |
| Cre12.g506500 | No alias | Histone superfamily protein | 0.01 | Orthogroups_2024-Update | |
| Cre17.g708700 | No alias | Histone superfamily protein | 0.01 | Orthogroups_2024-Update | |
| Cre17.g709050 | No alias | Histone superfamily protein | 0.01 | Orthogroups_2024-Update | |
| Kfl00240_g18 | kfl00240_g18_v1.1 | (at5g10980 : 254.0) Histone superfamily protein;... | 0.02 | Orthogroups_2024-Update | |
| LOC_Os04g34240 | No alias | histone H3, putative, expressed | 0.03 | Orthogroups_2024-Update | |
| LOC_Os11g05730 | No alias | histone H3, putative, expressed | 0.02 | Orthogroups_2024-Update | |
| MA_350032g0010 | No alias | (at5g10980 : 266.0) Histone superfamily protein;... | 0.02 | Orthogroups_2024-Update | |
| MA_56411g0010 | No alias | (at5g65360 : 262.0) Histone superfamily protein;... | 0.02 | Orthogroups_2024-Update | |
| Mp7g16200.1 | No alias | histone (H3) | 0.02 | Orthogroups_2024-Update | |
| PSME_00005861-RA | No alias | (at5g65360 : 181.0) Histone superfamily protein;... | 0.03 | Orthogroups_2024-Update | |
| Seita.7G095500.1 | No alias | histone *(H3) | 0.02 | Orthogroups_2024-Update | |
| Sobic.001G297400.1 | No alias | histone *(H3) | 0.03 | Orthogroups_2024-Update | |
| Sobic.004G170500.2 | No alias | histone *(H3) | 0.03 | Orthogroups_2024-Update | |
| Solyc01g074000 | No alias | Histone H3 (AHRD V3.3 *** A0A0E0P928_ORYRU) | 0.03 | Orthogroups_2024-Update | |
| Solyc01g079110 | No alias | Histone H3 (AHRD V3.3 *** A0A0V0H170_SOLCH) | 0.02 | Orthogroups_2024-Update | |
| Solyc01g080600 | No alias | Histone H3 (AHRD V3.3 *** A0A068VC55_COFCA) | 0.02 | Orthogroups_2024-Update | |
| Solyc01g086820 | No alias | Histone H3 (AHRD V3.3 *** A0A068VC55_COFCA) | 0.03 | Orthogroups_2024-Update | |
| Solyc02g077480 | No alias | Histone H3 (AHRD V3.3 *** A0A068VC55_COFCA) | 0.03 | Orthogroups_2024-Update | |
| Solyc04g074580 | No alias | Histone H3 (AHRD V3.3 *** K7VSQ3_MAIZE) | 0.03 | Orthogroups_2024-Update | |
| Solyc10g008910 | No alias | Histone H3 (AHRD V3.3 *** A0A068VC55_COFCA) | 0.03 | Orthogroups_2024-Update | |
| Solyc12g056540 | No alias | Histone H3 (AHRD V3.3 *** K4DFY5_SOLLC) | 0.05 | Orthogroups_2024-Update | |
| Sopen01g030620 | No alias | Core histone H2A/H2B/H3/H4 | 0.04 | Orthogroups_2024-Update | |
| Sopen01g030790 | No alias | Core histone H2A/H2B/H3/H4 | 0.03 | Orthogroups_2024-Update | |
| Sopen01g032420 | No alias | Core histone H2A/H2B/H3/H4 | 0.02 | Orthogroups_2024-Update | |
| Sopen01g033540 | No alias | Core histone H2A/H2B/H3/H4 | 0.04 | Orthogroups_2024-Update | |
| Sopen01g033830 | No alias | Core histone H2A/H2B/H3/H4 | 0.03 | Orthogroups_2024-Update | |
| Sopen12g029140 | No alias | Core histone H2A/H2B/H3/H4 | 0.03 | Orthogroups_2024-Update |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| CC | GO:0000786 | nucleosome | IEA | InterProScan predictions |
| MF | GO:0003677 | DNA binding | IEA | InterProScan predictions |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003678 | DNA helicase activity | IEP | Predicted GO |
| MF | GO:0003887 | DNA-directed DNA polymerase activity | IEP | Predicted GO |
| MF | GO:0004003 | ATP-dependent DNA helicase activity | IEP | Predicted GO |
| MF | GO:0005509 | calcium ion binding | IEP | Predicted GO |
| CC | GO:0005667 | transcription factor complex | IEP | Predicted GO |
| MF | GO:0008026 | ATP-dependent helicase activity | IEP | Predicted GO |
| MF | GO:0008094 | DNA-dependent ATPase activity | IEP | Predicted GO |
| MF | GO:0008168 | methyltransferase activity | IEP | Predicted GO |
| MF | GO:0016741 | transferase activity, transferring one-carbon groups | IEP | Predicted GO |
| MF | GO:0016787 | hydrolase activity | IEP | Predicted GO |
| MF | GO:0016788 | hydrolase activity, acting on ester bonds | IEP | Predicted GO |
| MF | GO:0034061 | DNA polymerase activity | IEP | Predicted GO |
| MF | GO:0046912 | transferase activity, transferring acyl groups, acyl groups converted into alkyl on transfer | IEP | Predicted GO |
| MF | GO:0046983 | protein dimerization activity | IEP | Predicted GO |
| MF | GO:0070035 | purine NTP-dependent helicase activity | IEP | Predicted GO |
| MF | GO:0140097 | catalytic activity, acting on DNA | IEP | Predicted GO |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR007125 | Histone_H2A/H2B/H3 | 1 | 132 |
| No external refs found! |