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Description : Tetratricopeptide repeat (TPR)-like superfamily protein
Gene families : OG_42_0000001 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | Selaginella: 79732 | |
| Cluster | HCCA clusters: Cluster_137 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| 123298 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.03 | Orthogroups_2024-Update | |
| 83883 | No alias | Pentatricopeptide repeat (PPR) superfamily protein | 0.03 | Orthogroups_2024-Update | |
| At3g20730 | No alias | Pentatricopeptide repeat-containing protein At3g20730... | 0.02 | Orthogroups_2024-Update | |
| At5g13270 | No alias | Pentatricopeptide repeat-containing protein At5g13270,... | 0.03 | Orthogroups_2024-Update | |
| At5g56310 | No alias | Pentatricopeptide repeat-containing protein At5g56310... | 0.03 | Orthogroups_2024-Update | |
| Brara.A03095.1 | No alias | Unknown function | 0.02 | Orthogroups_2024-Update | |
| Glyma.06G161900 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.02 | Orthogroups_2024-Update | |
| Glyma.12G118200 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.01 | Orthogroups_2024-Update | |
| Glyma.13G150300 | No alias | Pentatricopeptide repeat (PPR) superfamily protein | 0.03 | Orthogroups_2024-Update | |
| Potri.002G245200 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.02 | Orthogroups_2024-Update |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0008270 | zinc ion binding | IEA | InterProScan predictions |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No Predicted GO terms available for this sequence |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR002885 | Pentatricopeptide_repeat | 314 | 358 |
| IPR002885 | Pentatricopeptide_repeat | 520 | 567 |
| IPR032867 | DYW_dom | 696 | 819 |
| IPR002885 | Pentatricopeptide_repeat | 108 | 157 |
| IPR002885 | Pentatricopeptide_repeat | 213 | 243 |
| IPR002885 | Pentatricopeptide_repeat | 184 | 208 |
| IPR002885 | Pentatricopeptide_repeat | 286 | 310 |
| IPR002885 | Pentatricopeptide_repeat | 414 | 441 |
| IPR002885 | Pentatricopeptide_repeat | 386 | 412 |
| No external refs found! |