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  5. 81625

81625


Description : Pentatricopeptide repeat (PPR) superfamily protein


Gene families : OG_42_0000001 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Selaginella: 81625

Target Alias Description ECC score Gene Family Method Actions
103099 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.03 Orthogroups_2024-Update
26969 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.02 Orthogroups_2024-Update
A4A49_26813 No alias putative pentatricopeptide repeat-containing protein,... 0.02 Orthogroups_2024-Update
At2g04860 No alias Pentatricopeptide repeat-containing protein At2g04860... 0.05 Orthogroups_2024-Update
At3g16610 No alias Pentatricopeptide repeat-containing protein At3g16610... 0.03 Orthogroups_2024-Update
At3g57430 No alias Pentatricopeptide repeat-containing protein At3g57430,... 0.01 Orthogroups_2024-Update
Glyma.02G201800 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.03 Orthogroups_2024-Update
HORVU0Hr1G015970.1 No alias Unknown function 0.04 Orthogroups_2024-Update
HORVU3Hr1G079860.2 No alias Unknown function 0.04 Orthogroups_2024-Update
HORVU5Hr1G056450.2 No alias Unknown function 0.03 Orthogroups_2024-Update
LOC_Os01g66160 No alias pentatricopeptide, putative, expressed 0.02 Orthogroups_2024-Update
MA_10433543g0010 No alias (at4g13650 : 679.0) Pentatricopeptide repeat (PPR)... 0.04 Orthogroups_2024-Update
MA_43615g0010 No alias (at1g11290 : 687.0) Pentatricopeptide Repeat Protein... 0.04 Orthogroups_2024-Update
MA_59599g0010 No alias (at3g49170 : 646.0) embryo defective 2261 (EMB2261);... 0.02 Orthogroups_2024-Update
MA_668740g0020 No alias (at3g13770 : 627.0) Pentatricopeptide repeat (PPR)... 0.03 Orthogroups_2024-Update
MA_84538g0010 No alias (at4g13650 : 633.0) Pentatricopeptide repeat (PPR)... 0.07 Orthogroups_2024-Update
MA_9526611g0020 No alias (at3g57430 : 726.0) Encodes a chloroplast RNA editing... 0.03 Orthogroups_2024-Update
PSME_00003163-RA No alias (at3g23330 : 192.0) Tetratricopeptide repeat (TPR)-like... 0.04 Orthogroups_2024-Update
Potri.002G245200 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.02 Orthogroups_2024-Update
Potri.003G088600 No alias Pentatricopeptide repeat (PPR-like) superfamily protein 0.03 Orthogroups_2024-Update
Potri.006G252400 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.04 Orthogroups_2024-Update
Potri.013G089400 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.02 Orthogroups_2024-Update
Solyc02g094480 No alias Pentatricopeptide repeat-containing protein (AHRD V3.3... 0.02 Orthogroups_2024-Update
Sopen01g032720 No alias PPR repeat family 0.03 Orthogroups_2024-Update
Sopen01g041720 No alias PPR repeat family 0.01 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004175 endopeptidase activity IEP Predicted GO
MF GO:0004222 metalloendopeptidase activity IEP Predicted GO
MF GO:0008237 metallopeptidase activity IEP Predicted GO
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 22 69
IPR002885 Pentatricopeptide_repeat 221 268
IPR002885 Pentatricopeptide_repeat 120 167
IPR002885 Pentatricopeptide_repeat 322 368
IPR002885 Pentatricopeptide_repeat 396 415
IPR002885 Pentatricopeptide_repeat 296 321
No external refs found!