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  5. 82033

82033


Description : pleckstrin homology (PH) domain-containing protein


Gene families : OG_42_0000864 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000864_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Selaginella: 82033
Cluster HCCA clusters: Cluster_58

Target Alias Description ECC score Gene Family Method Actions
At1g48090 No alias calcium-dependent lipid-binding family protein... 0.04 Orthogroups_2024-Update
Bradi3g43345 No alias calcium-dependent lipid-binding family protein 0.07 Orthogroups_2024-Update
Glyma.07G233100 No alias calcium-dependent lipid-binding family protein 0.03 Orthogroups_2024-Update
HORVU1Hr1G055000.10 No alias Unknown function 0.04 Orthogroups_2024-Update
HORVU6Hr1G047560.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Kfl00451_0090 kfl00451_0090_v1.1 (at1g48090 : 1719.0) calcium-dependent lipid-binding... 0.03 Orthogroups_2024-Update
MA_10437247g0010 No alias (at4g17140 : 1094.0) pleckstrin homology (PH)... 0.02 Orthogroups_2024-Update
PSME_00009237-RA No alias (at1g48090 : 378.0) calcium-dependent lipid-binding... 0.04 Orthogroups_2024-Update
PSME_00039298-RA No alias (at1g48090 : 467.0) calcium-dependent lipid-binding... 0.04 Orthogroups_2024-Update
Pp1s314_26V6 No alias vacuolar protein sorting-associated 0.04 Orthogroups_2024-Update
Seita.1G158900.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Solyc09g009370 No alias Calcium-dependent lipid-binding-like protein (AHRD V3.3... 0.02 Orthogroups_2024-Update
evm.model.tig00000042.91 No alias (at4g17140 : 114.0) pleckstrin homology (PH)... 0.06 Orthogroups_2024-Update
evm.model.tig00001343.3 No alias (at4g17140 : 125.0) pleckstrin homology (PH)... 0.03 Orthogroups_2024-Update
evm.model.tig00020554.153 No alias no hits & (original description: no original description) 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000375 RNA splicing, via transesterification reactions IEP Predicted GO
BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP Predicted GO
BP GO:0000398 mRNA splicing, via spliceosome IEP Predicted GO
CC GO:0000428 DNA-directed RNA polymerase complex IEP Predicted GO
MF GO:0003857 3-hydroxyacyl-CoA dehydrogenase activity IEP Predicted GO
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP Predicted GO
MF GO:0004356 glutamate-ammonia ligase activity IEP Predicted GO
CC GO:0005665 RNA polymerase II, core complex IEP Predicted GO
BP GO:0006082 organic acid metabolic process IEP Predicted GO
BP GO:0006366 transcription by RNA polymerase II IEP Predicted GO
BP GO:0006397 mRNA processing IEP Predicted GO
BP GO:0006541 glutamine metabolic process IEP Predicted GO
BP GO:0006542 glutamine biosynthetic process IEP Predicted GO
BP GO:0006631 fatty acid metabolic process IEP Predicted GO
BP GO:0008380 RNA splicing IEP Predicted GO
BP GO:0008652 cellular amino acid biosynthetic process IEP Predicted GO
BP GO:0009064 glutamine family amino acid metabolic process IEP Predicted GO
BP GO:0009084 glutamine family amino acid biosynthetic process IEP Predicted GO
BP GO:0016070 RNA metabolic process IEP Predicted GO
BP GO:0016071 mRNA metabolic process IEP Predicted GO
MF GO:0016211 ammonia ligase activity IEP Predicted GO
MF GO:0016879 ligase activity, forming carbon-nitrogen bonds IEP Predicted GO
MF GO:0016880 acid-ammonia (or amide) ligase activity IEP Predicted GO
MF GO:0017069 snRNA binding IEP Predicted GO
MF GO:0017070 U6 snRNA binding IEP Predicted GO
BP GO:0019752 carboxylic acid metabolic process IEP Predicted GO
MF GO:0030623 U5 snRNA binding IEP Predicted GO
CC GO:0030880 RNA polymerase complex IEP Predicted GO
MF GO:0034062 5'-3' RNA polymerase activity IEP Predicted GO
BP GO:0043436 oxoacid metabolic process IEP Predicted GO
CC GO:0044451 nucleoplasm part IEP Predicted GO
CC GO:0055029 nuclear DNA-directed RNA polymerase complex IEP Predicted GO
CC GO:0061695 transferase complex, transferring phosphorus-containing groups IEP Predicted GO
MF GO:0097747 RNA polymerase activity IEP Predicted GO
BP GO:1901605 alpha-amino acid metabolic process IEP Predicted GO
BP GO:1901607 alpha-amino acid biosynthetic process IEP Predicted GO
CC GO:1990234 transferase complex IEP Predicted GO
InterPro domains Description Start Stop
IPR031646 VPS13_N2 128 195
IPR026854 VPS13_N 2 93
No external refs found!