1. Home
  2. Species
  3. Selaginella moellendorffii
  4. Sequence
  5. 82058

82058


Description : Tetratricopeptide repeat (TPR)-like superfamily protein


Gene families : OG_42_0000001 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Selaginella: 82058
Cluster HCCA clusters: Cluster_183

Target Alias Description ECC score Gene Family Method Actions
At2g36730 No alias Pentatricopeptide repeat-containing protein At2g36730... 0.04 Orthogroups_2024-Update
Bradi1g36010 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.04 Orthogroups_2024-Update
Bradi1g53600 No alias pentatricopeptide (PPR) repeat-containing protein 0.03 Orthogroups_2024-Update
Bradi3g51740 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.03 Orthogroups_2024-Update
Bradi4g40340 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.04 Orthogroups_2024-Update
Brara.J02567.1 No alias RNA editing factor *(MEF37) 0.02 Orthogroups_2024-Update
Glyma.01G237100 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.02 Orthogroups_2024-Update
Glyma.04G158200 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.02 Orthogroups_2024-Update
Glyma.16G206000 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.03 Orthogroups_2024-Update
HORVU2Hr1G081690.1 No alias RNA editing factor *(OTP86) 0.03 Orthogroups_2024-Update
HORVU4Hr1G064880.2 No alias Unknown function 0.04 Orthogroups_2024-Update
LOC_Os02g26940 No alias vegetative storage protein, putative, expressed 0.02 Orthogroups_2024-Update
MA_31170g0010 No alias (at1g11290 : 681.0) Pentatricopeptide Repeat Protein... 0.03 Orthogroups_2024-Update
MA_835083g0010 No alias (at1g11290 : 592.0) Pentatricopeptide Repeat Protein... 0.03 Orthogroups_2024-Update
PSME_00003207-RA No alias (at3g03580 : 671.0) Tetratricopeptide repeat (TPR)-like... 0.04 Orthogroups_2024-Update
PSME_00011618-RA No alias (at3g57430 : 608.0) Encodes a chloroplast RNA editing... 0.02 Orthogroups_2024-Update
PSME_00011804-RA No alias (at3g13770 : 548.0) Pentatricopeptide repeat (PPR)... 0.03 Orthogroups_2024-Update
PSME_00012885-RA No alias (at1g08070 : 603.0) Encodes a chloroplast RNA editing... 0.03 Orthogroups_2024-Update
PSME_00013800-RA No alias (at2g03880 : 405.0) Pentatricopeptide repeat (PPR)... 0.05 Orthogroups_2024-Update
PSME_00015835-RA No alias (at4g01030 : 610.0) pentatricopeptide (PPR)... 0.02 Orthogroups_2024-Update
PSME_00016831-RA No alias (at3g12770 : 618.0) Encodes a pentatricopeptide repeat... 0.03 Orthogroups_2024-Update
PSME_00016832-RA No alias (at4g18750 : 587.0) Encodes a pentatricopeptide (PPR)... 0.02 Orthogroups_2024-Update
PSME_00020178-RA No alias (at3g03580 : 731.0) Tetratricopeptide repeat (TPR)-like... 0.03 Orthogroups_2024-Update
PSME_00021735-RA No alias (at4g33170 : 600.0) Tetratricopeptide repeat (TPR)-like... 0.02 Orthogroups_2024-Update
PSME_00022065-RA No alias (at3g57430 : 642.0) Encodes a chloroplast RNA editing... 0.04 Orthogroups_2024-Update
PSME_00024026-RA No alias (at4g20770 : 565.0) Pentatricopeptide repeat (PPR)... 0.03 Orthogroups_2024-Update
PSME_00025196-RA No alias (at3g03580 : 681.0) Tetratricopeptide repeat (TPR)-like... 0.02 Orthogroups_2024-Update
PSME_00032004-RA No alias (at1g19720 : 530.0) Pentatricopeptide repeat (PPR-like)... 0.03 Orthogroups_2024-Update
PSME_00032414-RA No alias (at2g27610 : 637.0) Tetratricopeptide repeat (TPR)-like... 0.03 Orthogroups_2024-Update
PSME_00038705-RA No alias (at3g23330 : 523.0) Tetratricopeptide repeat (TPR)-like... 0.04 Orthogroups_2024-Update
PSME_00045217-RA No alias (at4g18750 : 610.0) Encodes a pentatricopeptide (PPR)... 0.03 Orthogroups_2024-Update
Potri.013G145000 No alias Pentatricopeptide repeat (PPR-like) superfamily protein 0.03 Orthogroups_2024-Update
Seita.7G324400.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Solyc03g119950 No alias Pentatricopeptide repeat-containing family protein (AHRD... 0.02 Orthogroups_2024-Update
Solyc11g005960 No alias Pentatricopeptide repeat-containing protein (AHRD V3.3... 0.03 Orthogroups_2024-Update
Sopen09g004810 No alias PPR repeat 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004298 threonine-type endopeptidase activity IEP Predicted GO
MF GO:0004721 phosphoprotein phosphatase activity IEP Predicted GO
MF GO:0004842 ubiquitin-protein transferase activity IEP Predicted GO
CC GO:0005839 proteasome core complex IEP Predicted GO
BP GO:0006996 organelle organization IEP Predicted GO
MF GO:0008138 protein tyrosine/serine/threonine phosphatase activity IEP Predicted GO
BP GO:0016311 dephosphorylation IEP Predicted GO
BP GO:0016567 protein ubiquitination IEP Predicted GO
MF GO:0016791 phosphatase activity IEP Predicted GO
MF GO:0019787 ubiquitin-like protein transferase activity IEP Predicted GO
BP GO:0032446 protein modification by small protein conjugation IEP Predicted GO
BP GO:0051603 proteolysis involved in cellular protein catabolic process IEP Predicted GO
MF GO:0070003 threonine-type peptidase activity IEP Predicted GO
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 81 104
IPR002885 Pentatricopeptide_repeat 7 37
IPR002885 Pentatricopeptide_repeat 109 156
No external refs found!