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  5. 82255

82255


Description : Tetratricopeptide repeat (TPR)-like superfamily protein


Gene families : OG_42_0000001 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Selaginella: 82255

Target Alias Description ECC score Gene Family Method Actions
A4A49_18851 No alias pentatricopeptide repeat-containing protein 0.01 Orthogroups_2024-Update
At3g49170 No alias Pentatricopeptide repeat-containing protein At3g49170,... 0.03 Orthogroups_2024-Update
Bradi1g12697 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.05 Orthogroups_2024-Update
GRMZM2G481373 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.02 Orthogroups_2024-Update
Glyma.03G264700 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.02 Orthogroups_2024-Update
Glyma.07G033300 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.03 Orthogroups_2024-Update
Glyma.12G005600 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.02 Orthogroups_2024-Update
Glyma.15G073600 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.03 Orthogroups_2024-Update
Glyma.19G090900 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.03 Orthogroups_2024-Update
HORVU0Hr1G001760.1 No alias Unknown function 0.03 Orthogroups_2024-Update
HORVU1Hr1G087370.1 No alias Unknown function 0.04 Orthogroups_2024-Update
HORVU2Hr1G028520.2 No alias Unknown function 0.03 Orthogroups_2024-Update
HORVU5Hr1G113840.2 No alias Unknown function 0.07 Orthogroups_2024-Update
LOC_Os01g60250 No alias pentatricopeptide, putative, expressed 0.01 Orthogroups_2024-Update
LOC_Os05g24150 No alias tetratricopeptide-like helical, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os07g09370 No alias pentatricopeptide, putative, expressed 0.01 Orthogroups_2024-Update
MA_11759g0010 No alias (at4g13650 : 566.0) Pentatricopeptide repeat (PPR)... 0.04 Orthogroups_2024-Update
MA_123466g0010 No alias (at3g57430 : 553.0) Encodes a chloroplast RNA editing... 0.02 Orthogroups_2024-Update
MA_20168g0010 No alias (at3g26782 : 533.0) Tetratricopeptide repeat (TPR)-like... 0.03 Orthogroups_2024-Update
MA_27147g0010 No alias (at3g49170 : 606.0) embryo defective 2261 (EMB2261);... 0.03 Orthogroups_2024-Update
MA_38266g0010 No alias (at3g12770 : 649.0) Encodes a pentatricopeptide repeat... 0.05 Orthogroups_2024-Update
MA_385322g0010 No alias (at1g08070 : 385.0) Encodes a chloroplast RNA editing... 0.03 Orthogroups_2024-Update
MA_653417g0010 No alias (at4g13650 : 731.0) Pentatricopeptide repeat (PPR)... 0.03 Orthogroups_2024-Update
MA_68084g0010 No alias (at1g11290 : 535.0) Pentatricopeptide Repeat Protein... 0.04 Orthogroups_2024-Update
MA_7907g0020 No alias (at3g57430 : 717.0) Encodes a chloroplast RNA editing... 0.06 Orthogroups_2024-Update
MA_94165g0010 No alias (at1g11290 : 612.0) Pentatricopeptide Repeat Protein... 0.03 Orthogroups_2024-Update
PSME_00001719-RA No alias (at4g18750 : 701.0) Encodes a pentatricopeptide (PPR)... 0.02 Orthogroups_2024-Update
PSME_00005903-RA No alias (at2g22070 : 612.0) pentatricopeptide (PPR)... 0.02 Orthogroups_2024-Update
PSME_00006107-RA No alias (at1g11290 : 668.0) Pentatricopeptide Repeat Protein... 0.02 Orthogroups_2024-Update
PSME_00007181-RA No alias (at3g03580 : 567.0) Tetratricopeptide repeat (TPR)-like... 0.04 Orthogroups_2024-Update
PSME_00009010-RA No alias (at4g13650 : 679.0) Pentatricopeptide repeat (PPR)... 0.03 Orthogroups_2024-Update
PSME_00010401-RA No alias (at4g18750 : 645.0) Encodes a pentatricopeptide (PPR)... 0.02 Orthogroups_2024-Update
PSME_00011207-RA No alias (at3g63370 : 641.0) Encodes a chloroplast RNA editing... 0.02 Orthogroups_2024-Update
PSME_00018595-RA No alias (at1g11290 : 678.0) Pentatricopeptide Repeat Protein... 0.02 Orthogroups_2024-Update
PSME_00022685-RA No alias (at3g46790 : 552.0) Encodes a member of a PCMP (plant... 0.02 Orthogroups_2024-Update
PSME_00033049-RA No alias (at1g11290 : 583.0) Pentatricopeptide Repeat Protein... 0.05 Orthogroups_2024-Update
PSME_00034005-RA No alias (at3g23330 : 585.0) Tetratricopeptide repeat (TPR)-like... 0.02 Orthogroups_2024-Update
PSME_00035796-RA No alias (at1g11290 : 732.0) Pentatricopeptide Repeat Protein... 0.02 Orthogroups_2024-Update
PSME_00042901-RA No alias (at4g33170 : 526.0) Tetratricopeptide repeat (TPR)-like... 0.04 Orthogroups_2024-Update
PSME_00042924-RA No alias (at3g57430 : 662.0) Encodes a chloroplast RNA editing... 0.03 Orthogroups_2024-Update
PSME_00051747-RA No alias (at1g11290 : 641.0) Pentatricopeptide Repeat Protein... 0.02 Orthogroups_2024-Update
PSME_00052756-RA No alias (at3g09040 : 614.0) Pentatricopeptide repeat (PPR)... 0.02 Orthogroups_2024-Update
PSME_00056424-RA No alias (at2g22070 : 461.0) pentatricopeptide (PPR)... 0.04 Orthogroups_2024-Update
PSME_00056779-RA No alias (at4g13650 : 709.0) Pentatricopeptide repeat (PPR)... 0.02 Orthogroups_2024-Update
PSME_00057248-RA No alias (at1g11290 : 733.0) Pentatricopeptide Repeat Protein... 0.03 Orthogroups_2024-Update
Potri.005G012600 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.02 Orthogroups_2024-Update
Potri.006G001200 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.02 Orthogroups_2024-Update
Potri.006G244500 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.01 Orthogroups_2024-Update
Potri.013G058900 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.01 Orthogroups_2024-Update
Potri.018G071800 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.01 Orthogroups_2024-Update
Seita.1G263300.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Seita.5G242100.1 No alias Unknown function 0.08 Orthogroups_2024-Update
Sobic.001G509700.2 No alias Unknown function 0.03 Orthogroups_2024-Update
Sobic.003G277100.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Sobic.004G174800.2 No alias Unknown function 0.02 Orthogroups_2024-Update
Sobic.004G199400.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Sobic.005G210700.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Sopen10g006390 No alias PPR repeat family 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA InterProScan predictions
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 97 123
IPR002885 Pentatricopeptide_repeat 265 291
IPR002885 Pentatricopeptide_repeat 199 222
IPR002885 Pentatricopeptide_repeat 126 154
IPR002885 Pentatricopeptide_repeat 22 69
IPR032867 DYW_dom 297 422
No external refs found!