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  5. 83034

83034


Description : Pentatricopeptide repeat (PPR) superfamily protein


Gene families : OG_42_0000001 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Selaginella: 83034
Cluster HCCA clusters: Cluster_183

Target Alias Description ECC score Gene Family Method Actions
Bradi3g20480 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.03 Orthogroups_2024-Update
Brara.A00314.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Brara.K00527.1 No alias RNA editing factor *(MEF29) 0.03 Orthogroups_2024-Update
MA_117650g0010 No alias (at1g11290 : 615.0) Pentatricopeptide Repeat Protein... 0.04 Orthogroups_2024-Update
MA_177230g0010 No alias (at2g22070 : 585.0) pentatricopeptide (PPR)... 0.03 Orthogroups_2024-Update
MA_39595g0010 No alias (at1g08070 : 552.0) Encodes a chloroplast RNA editing... 0.03 Orthogroups_2024-Update
PSME_00008509-RA No alias (at1g11290 : 604.0) Pentatricopeptide Repeat Protein... 0.03 Orthogroups_2024-Update
PSME_00037497-RA No alias (at4g13650 : 692.0) Pentatricopeptide repeat (PPR)... 0.05 Orthogroups_2024-Update
PSME_00039504-RA No alias (at4g13650 : 612.0) Pentatricopeptide repeat (PPR)... 0.03 Orthogroups_2024-Update
PSME_00056623-RA No alias (at2g03880 : 555.0) Pentatricopeptide repeat (PPR)... 0.04 Orthogroups_2024-Update
Seita.8G075300.1 No alias Unknown function 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0000287 magnesium ion binding IEP Predicted GO
MF GO:0004749 ribose phosphate diphosphokinase activity IEP Predicted GO
BP GO:0006644 phospholipid metabolic process IEP Predicted GO
BP GO:0006650 glycerophospholipid metabolic process IEP Predicted GO
MF GO:0016778 diphosphotransferase activity IEP Predicted GO
BP GO:0019637 organophosphate metabolic process IEP Predicted GO
BP GO:0030258 lipid modification IEP Predicted GO
BP GO:0046486 glycerolipid metabolic process IEP Predicted GO
BP GO:0046488 phosphatidylinositol metabolic process IEP Predicted GO
BP GO:0046834 lipid phosphorylation IEP Predicted GO
BP GO:0046854 phosphatidylinositol phosphorylation IEP Predicted GO
InterPro domains Description Start Stop
IPR032867 DYW_dom 466 590
IPR002885 Pentatricopeptide_repeat 93 123
IPR002885 Pentatricopeptide_repeat 63 89
IPR002885 Pentatricopeptide_repeat 292 339
IPR002885 Pentatricopeptide_repeat 191 239
No external refs found!