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  5. Solyc01g107960

Solyc01g107960


Description : bHLH transcription factor 009


Gene families : OG_42_0001476 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001476_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Solyc01g107960
Cluster HCCA clusters: Cluster_253

Target Alias Description ECC score Gene Family Method Actions
PSME_00010243-RA No alias no hits & (original description: no original description) 0.03 Orthogroups_2024-Update
Solyc01g107950 No alias bHLH transcription factor 008 0.02 Orthogroups_2024-Update
Solyc01g107970 No alias bHLH transcription factor 077 0.02 Orthogroups_2024-Update
Sopen01g050130 No alias Helix-loop-helix DNA-binding domain 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0046983 protein dimerization activity IEA InterProScan predictions
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Type GO Term Name Evidence Source
BP GO:0000105 histidine biosynthetic process IEP Predicted GO
MF GO:0003954 NADH dehydrogenase activity IEP Predicted GO
MF GO:0004399 histidinol dehydrogenase activity IEP Predicted GO
BP GO:0006547 histidine metabolic process IEP Predicted GO
MF GO:0008137 NADH dehydrogenase (ubiquinone) activity IEP Predicted GO
BP GO:0009072 aromatic amino acid family metabolic process IEP Predicted GO
BP GO:0009073 aromatic amino acid family biosynthetic process IEP Predicted GO
MF GO:0016655 oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor IEP Predicted GO
MF GO:0050136 NADH dehydrogenase (quinone) activity IEP Predicted GO
BP GO:0052803 imidazole-containing compound metabolic process IEP Predicted GO
BP GO:1901607 alpha-amino acid biosynthetic process IEP Predicted GO
InterPro domains Description Start Stop
IPR011598 bHLH_dom 97 128
No external refs found!