85784

Description : tryptophan synthase beta-subunit 1

Gene families : OG_42_0002861 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0002861_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Selaginella: 85784
Cluster	HCCA clusters: Cluster_190

Target	Alias	Description	ECC score	Gene Family Method
Bradi3g14490	No alias	tryptophan synthase beta-subunit 2	0.03	Orthogroups_2024-Update
Glyma.08G312300	No alias	tryptophan synthase beta-subunit 2	0.01	Orthogroups_2024-Update
Kfl00061_0210	kfl00061_0210_v1.1	(at5g54810 : 672.0) A.thaliana tryptophan synthase beta...	0.04	Orthogroups_2024-Update
Pp1s3_514V6	No alias	tryptophan synthase subunit beta	0.02	Orthogroups_2024-Update
Solyc10g018390	No alias	Tryptophan synthase (AHRD V3.3 *** K4CYW3_SOLLC)	0.02	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
No GO annotation available for this sequence

Type	GO Term	Name	Evidence	Source
MF	GO:0004298	threonine-type endopeptidase activity	IEP	Predicted GO
CC	GO:0005839	proteasome core complex	IEP	Predicted GO
BP	GO:0006511	ubiquitin-dependent protein catabolic process	IEP	Predicted GO
BP	GO:0009057	macromolecule catabolic process	IEP	Predicted GO
CC	GO:0019773	proteasome core complex, alpha-subunit complex	IEP	Predicted GO
BP	GO:0019941	modification-dependent protein catabolic process	IEP	Predicted GO
CC	GO:0032991	protein-containing complex	IEP	Predicted GO
BP	GO:0043632	modification-dependent macromolecule catabolic process	IEP	Predicted GO
BP	GO:0044265	cellular macromolecule catabolic process	IEP	Predicted GO
BP	GO:0051603	proteolysis involved in cellular protein catabolic process	IEP	Predicted GO
MF	GO:0070003	threonine-type peptidase activity	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR001926	PLP-dep	67	397

External Links

No external refs found!