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  5. 86162

86162


Description : Pentatricopeptide repeat (PPR) superfamily protein


Gene families : OG_42_0004020 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0004020_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Selaginella: 86162
Cluster HCCA clusters: Cluster_2

Target Alias Description ECC score Gene Family Method Actions
At1g09190 No alias Pentatricopeptide repeat-containing protein At1g09190... 0.03 Orthogroups_2024-Update
At2g21090 No alias Pentatricopeptide repeat-containing protein At2g21090... 0.03 Orthogroups_2024-Update
Bradi4g35376 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.03 Orthogroups_2024-Update
Brara.D01246.1 No alias Unknown function 0.04 Orthogroups_2024-Update
PSME_00050135-RA No alias (at2g13600 : 432.0) Pentatricopeptide repeat (PPR)... 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0008173 RNA methyltransferase activity IEP Predicted GO
MF GO:0008194 UDP-glycosyltransferase activity IEP Predicted GO
MF GO:0008375 acetylglucosaminyltransferase activity IEP Predicted GO
MF GO:0016740 transferase activity IEP Predicted GO
MF GO:0016757 transferase activity, transferring glycosyl groups IEP Predicted GO
MF GO:0016758 transferase activity, transferring hexosyl groups IEP Predicted GO
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 78 100
IPR002885 Pentatricopeptide_repeat 281 301
IPR002885 Pentatricopeptide_repeat 108 133
IPR002885 Pentatricopeptide_repeat 12 38
IPR002885 Pentatricopeptide_repeat 51 75
IPR002885 Pentatricopeptide_repeat 207 251
No external refs found!