86405

Description : Pentatricopeptide repeat (PPR) superfamily protein

Gene families : OG_42_0000001 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Selaginella: 86405
Cluster	HCCA clusters: Cluster_7

Target	Alias	Description	ECC score	Gene Family Method	Actions
PSME_00038093-RA	No alias	(at2g27610 : 590.0) Tetratricopeptide repeat (TPR)-like...	0.02	Orthogroups_2024-Update
PSME_00056966-RA	No alias	(at4g13650 : 674.0) Pentatricopeptide repeat (PPR)...	0.02	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0008270	zinc ion binding	IEA	InterProScan predictions
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043169	cation binding	None	Extended
MF	GO:0046872	metal ion binding	None	Extended
MF	GO:0046914	transition metal ion binding	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0042802	identical protein binding	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR032867	DYW_dom	781	904
IPR002885	Pentatricopeptide_repeat	400	447
IPR002885	Pentatricopeptide_repeat	298	346
IPR002885	Pentatricopeptide_repeat	604	653
IPR002885	Pentatricopeptide_repeat	271	297
IPR002885	Pentatricopeptide_repeat	170	192
IPR002885	Pentatricopeptide_repeat	682	705

External Links

No external refs found!