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  5. 87961

87961


Description : Pentatricopeptide repeat (PPR) superfamily protein


Gene families : OG_42_0012873 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0012873_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Selaginella: 87961
Cluster HCCA clusters: Cluster_94

Target Alias Description ECC score Gene Family Method Actions
MA_65862g0010 No alias (at4g18750 : 584.0) Encodes a pentatricopeptide (PPR)... 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004853 uroporphyrinogen decarboxylase activity IEP Predicted GO
BP GO:0006650 glycerophospholipid metabolic process IEP Predicted GO
BP GO:0006778 porphyrin-containing compound metabolic process IEP Predicted GO
BP GO:0006779 porphyrin-containing compound biosynthetic process IEP Predicted GO
MF GO:0016624 oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor IEP Predicted GO
MF GO:0016903 oxidoreductase activity, acting on the aldehyde or oxo group of donors IEP Predicted GO
BP GO:0030258 lipid modification IEP Predicted GO
BP GO:0033013 tetrapyrrole metabolic process IEP Predicted GO
BP GO:0033014 tetrapyrrole biosynthetic process IEP Predicted GO
BP GO:0046486 glycerolipid metabolic process IEP Predicted GO
BP GO:0046488 phosphatidylinositol metabolic process IEP Predicted GO
BP GO:0046834 lipid phosphorylation IEP Predicted GO
BP GO:0046854 phosphatidylinositol phosphorylation IEP Predicted GO
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 498 528
IPR002885 Pentatricopeptide_repeat 393 423
IPR002885 Pentatricopeptide_repeat 287 317
IPR002885 Pentatricopeptide_repeat 678 703
IPR002885 Pentatricopeptide_repeat 183 213
IPR002885 Pentatricopeptide_repeat 155 181
IPR002885 Pentatricopeptide_repeat 606 635
IPR002885 Pentatricopeptide_repeat 82 112
No external refs found!