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  5. 88474

88474


Description : Pentatricopeptide repeat (PPR) superfamily protein


Gene families : OG_42_0011407 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0011407_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Selaginella: 88474
Cluster HCCA clusters: Cluster_7


Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0001882 nucleoside binding IEP Predicted GO
MF GO:0001883 purine nucleoside binding IEP Predicted GO
MF GO:0004592 pantoate-beta-alanine ligase activity IEP Predicted GO
MF GO:0005525 GTP binding IEP Predicted GO
MF GO:0008270 zinc ion binding IEP Predicted GO
BP GO:0015939 pantothenate metabolic process IEP Predicted GO
BP GO:0015940 pantothenate biosynthetic process IEP Predicted GO
MF GO:0016742 hydroxymethyl-, formyl- and related transferase activity IEP Predicted GO
MF GO:0019001 guanyl nucleotide binding IEP Predicted GO
MF GO:0032549 ribonucleoside binding IEP Predicted GO
MF GO:0032550 purine ribonucleoside binding IEP Predicted GO
MF GO:0032561 guanyl ribonucleotide binding IEP Predicted GO
MF GO:0042802 identical protein binding IEP Predicted GO
MF GO:0046914 transition metal ion binding IEP Predicted GO
MF GO:0051539 4 iron, 4 sulfur cluster binding IEP Predicted GO
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 585 631
IPR002885 Pentatricopeptide_repeat 483 531
IPR002885 Pentatricopeptide_repeat 285 308
IPR002885 Pentatricopeptide_repeat 458 478
IPR002885 Pentatricopeptide_repeat 358 377
IPR002885 Pentatricopeptide_repeat 154 175
IPR002885 Pentatricopeptide_repeat 256 278
IPR002885 Pentatricopeptide_repeat 51 77
IPR002885 Pentatricopeptide_repeat 181 210
IPR002885 Pentatricopeptide_repeat 559 584
IPR002885 Pentatricopeptide_repeat 385 415
IPR002885 Pentatricopeptide_repeat 79 109
No external refs found!