Sopen01g033940

Description : Plus-3 domain

Gene families : OG_42_0000694 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000694_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Solanum release: Sopen01g033940
Cluster	HCCA clusters: Cluster_253

Target	Alias	Description	ECC score	Gene Family Method
Bradi2g57107	No alias	nucleic acid binding;zinc ion binding;DNA binding	0.03	Orthogroups_2024-Update
HORVU4Hr1G089290.7	No alias	protein factor (NERD) of non-canonical RdDM pathway	0.02	Orthogroups_2024-Update
LOC_Os03g02160	No alias	zinc finger C-x8-C-x5-C-x3-H type family protein, expressed	0.02	Orthogroups_2024-Update
Solyc01g103320	No alias	No description available	0.03	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	IEA	InterProScan predictions
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	IEA	InterProScan predictions
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR003121	SWIB_MDM2_domain	37	110
IPR004343	Plus-3_dom	162	261
IPR003169	GYF	537	577

External Links

No external refs found!