Sopen01g034110

Description : Zinc finger C-x8-C-x5-C-x3-H type (and similar)

Gene families : OG_42_0003826 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0003826_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Solanum release: Sopen01g034110
Cluster	HCCA clusters: Cluster_179

Target	Alias	Description	ECC score	Gene Family Method
Glyma.15G272400	No alias	zinc finger (CCCH-type/C3HC4-type RING finger) family protein	0.04	Orthogroups_2024-Update
Seita.1G297700.1	No alias	Unknown function	0.02	Orthogroups_2024-Update
Solyc01g087030	No alias	Zinc finger transcription factor 10	0.03	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043169	cation binding	None	Extended
MF	GO:0046872	metal ion binding	IEA	InterProScan predictions

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR018957	Znf_C3HC4_RING-type	207	264
IPR000571	Znf_CCCH	141	163

External Links

No external refs found!