Sopen01g034300

Description : Retinal pigment epithelial membrane protein

Gene families : OG_42_0000424 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000424_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Solanum release: Sopen01g034300
Cluster	HCCA clusters: Cluster_233

Target	Alias	Description	ECC score	Gene Family Method
HORVU6Hr1G068720.4	No alias	carotenoid cleavage dioxygenase *(CCD4) & EC_1.13...	0.02	Orthogroups_2024-Update
Potri.001G265900	No alias	carotenoid cleavage dioxygenase 1	0.02	Orthogroups_2024-Update
Sobic.001G509200.1	No alias	carotenoid cleavage dioxygenase *(CCD1) & EC_1.13...	0.02	Orthogroups_2024-Update
evm.model.tig00001128.6	No alias	no hits & (original description: no original description)	0.02	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
MF	GO:0016491	oxidoreductase activity	None	Extended
MF	GO:0016701	oxidoreductase activity, acting on single donors with incorporation of molecular oxygen	None	Extended
MF	GO:0016702	oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen	IEA	InterProScan predictions
MF	GO:0051213	dioxygenase activity	None	Extended
BP	GO:0055114	oxidation-reduction process	IEA	InterProScan predictions

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR004294	Carotenoid_Oase	59	534

External Links

No external refs found!