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  5. Sopen01g034480

Sopen01g034480


Description : Leucine rich repeat


Gene families : OG_42_0000172 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000172_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Sopen01g034480
Cluster HCCA clusters: Cluster_28

Target Alias Description ECC score Gene Family Method Actions
Glyma.16G174050 No alias Leucine-rich repeat (LRR) family protein 0.03 Orthogroups_2024-Update
Glyma.16G176400 No alias disease resistance family protein / LRR family protein 0.03 Orthogroups_2024-Update
Solyc12g005620 No alias Leucine-rich repeat receptor-like protein kinase family... 0.05 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA InterProScan predictions
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR001611 Leu-rich_rpt 603 661
IPR001611 Leu-rich_rpt 790 846
IPR001611 Leu-rich_rpt 428 488
IPR013210 LRR_N_plant-typ 18 55
IPR001611 Leu-rich_rpt 674 693
No external refs found!