Description : Tetratricopeptide repeat (TPR)-like superfamily protein
Gene families : OG_42_0000001 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | Selaginella: 96227 | |
Cluster | HCCA clusters: Cluster_94 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
MA_10157572g0010 | No alias | (at4g18750 : 548.0) Encodes a pentatricopeptide (PPR)... | 0.02 | Orthogroups_2024-Update | |
MA_126037g0020 | No alias | (at4g02750 : 474.0) Tetratricopeptide repeat (TPR)-like... | 0.02 | Orthogroups_2024-Update | |
MA_28051g0010 | No alias | (at1g11290 : 601.0) Pentatricopeptide Repeat Protein... | 0.03 | Orthogroups_2024-Update | |
MA_8319g0010 | No alias | (at4g02750 : 466.0) Tetratricopeptide repeat (TPR)-like... | 0.02 | Orthogroups_2024-Update | |
PSME_00000162-RA | No alias | (at2g27610 : 616.0) Tetratricopeptide repeat (TPR)-like... | 0.03 | Orthogroups_2024-Update | |
PSME_00005130-RA | No alias | (at4g33990 : 552.0) embryo defective 2758 (EMB2758);... | 0.02 | Orthogroups_2024-Update | |
PSME_00007848-RA | No alias | (at3g03580 : 694.0) Tetratricopeptide repeat (TPR)-like... | 0.02 | Orthogroups_2024-Update | |
PSME_00008750-RA | No alias | (at1g15510 : 464.0) Encodes a pentatricopeptide repeat... | 0.02 | Orthogroups_2024-Update | |
PSME_00010400-RA | No alias | (at4g02750 : 490.0) Tetratricopeptide repeat (TPR)-like... | 0.02 | Orthogroups_2024-Update | |
PSME_00012885-RA | No alias | (at1g08070 : 603.0) Encodes a chloroplast RNA editing... | 0.03 | Orthogroups_2024-Update | |
PSME_00016832-RA | No alias | (at4g18750 : 587.0) Encodes a pentatricopeptide (PPR)... | 0.02 | Orthogroups_2024-Update | |
PSME_00017819-RA | No alias | (at3g03580 : 689.0) Tetratricopeptide repeat (TPR)-like... | 0.02 | Orthogroups_2024-Update | |
PSME_00026228-RA | No alias | (at3g57430 : 606.0) Encodes a chloroplast RNA editing... | 0.03 | Orthogroups_2024-Update | |
PSME_00028519-RA | No alias | (at2g22070 : 606.0) pentatricopeptide (PPR)... | 0.02 | Orthogroups_2024-Update | |
PSME_00031955-RA | No alias | (at1g11290 : 710.0) Pentatricopeptide Repeat Protein... | 0.02 | Orthogroups_2024-Update | |
PSME_00036890-RA | No alias | (at1g11290 : 679.0) Pentatricopeptide Repeat Protein... | 0.03 | Orthogroups_2024-Update | |
PSME_00039409-RA | No alias | (at4g18750 : 537.0) Encodes a pentatricopeptide (PPR)... | 0.03 | Orthogroups_2024-Update | |
PSME_00041541-RA | No alias | (at3g12770 : 598.0) Encodes a pentatricopeptide repeat... | 0.02 | Orthogroups_2024-Update | |
PSME_00052953-RA | No alias | (at4g13650 : 635.0) Pentatricopeptide repeat (PPR)... | 0.02 | Orthogroups_2024-Update | |
PSME_00056507-RA | No alias | (at1g16480 : 719.0) Tetratricopeptide repeat (TPR)-like... | 0.03 | Orthogroups_2024-Update | |
PSME_00056779-RA | No alias | (at4g13650 : 709.0) Pentatricopeptide repeat (PPR)... | 0.02 | Orthogroups_2024-Update | |
PSME_00056965-RA | No alias | (at4g39530 : 592.0) Tetratricopeptide repeat (TPR)-like... | 0.02 | Orthogroups_2024-Update | |
PSME_00057046-RA | No alias | (at4g18750 : 592.0) Encodes a pentatricopeptide (PPR)... | 0.03 | Orthogroups_2024-Update | |
Potri.016G065500 | No alias | Pentatricopeptide repeat (PPR) superfamily protein | 0.02 | Orthogroups_2024-Update | |
Seita.3G224300.1 | No alias | Unknown function | 0.02 | Orthogroups_2024-Update | |
Sopen03g028590 | No alias | PPR repeat family | 0.02 | Orthogroups_2024-Update | |
Sopen09g031050 | No alias | PPR repeat | 0.02 | Orthogroups_2024-Update | |
Sopen11g029050 | No alias | PPR repeat family | 0.02 | Orthogroups_2024-Update |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No GO annotation available for this sequence |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
BP | GO:0006605 | protein targeting | IEP | Predicted GO |
BP | GO:0006612 | protein targeting to membrane | IEP | Predicted GO |
BP | GO:0006613 | cotranslational protein targeting to membrane | IEP | Predicted GO |
BP | GO:0006614 | SRP-dependent cotranslational protein targeting to membrane | IEP | Predicted GO |
MF | GO:0008270 | zinc ion binding | IEP | Predicted GO |
BP | GO:0010564 | regulation of cell cycle process | IEP | Predicted GO |
CC | GO:0019898 | extrinsic component of membrane | IEP | Predicted GO |
BP | GO:0032465 | regulation of cytokinesis | IEP | Predicted GO |
BP | GO:0032954 | regulation of cytokinetic process | IEP | Predicted GO |
BP | GO:0032955 | regulation of division septum assembly | IEP | Predicted GO |
MF | GO:0043169 | cation binding | IEP | Predicted GO |
BP | GO:0044087 | regulation of cellular component biogenesis | IEP | Predicted GO |
BP | GO:0045047 | protein targeting to ER | IEP | Predicted GO |
MF | GO:0046872 | metal ion binding | IEP | Predicted GO |
MF | GO:0046914 | transition metal ion binding | IEP | Predicted GO |
BP | GO:0051128 | regulation of cellular component organization | IEP | Predicted GO |
BP | GO:0051301 | cell division | IEP | Predicted GO |
BP | GO:0051302 | regulation of cell division | IEP | Predicted GO |
BP | GO:0070972 | protein localization to endoplasmic reticulum | IEP | Predicted GO |
BP | GO:0072599 | establishment of protein localization to endoplasmic reticulum | IEP | Predicted GO |
BP | GO:0072657 | protein localization to membrane | IEP | Predicted GO |
BP | GO:0090150 | establishment of protein localization to membrane | IEP | Predicted GO |
BP | GO:1901891 | regulation of cell septum assembly | IEP | Predicted GO |
No external refs found! |