97343

Description : pentatricopeptide (PPR) repeat-containing protein

Gene families : OG_42_0000001 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Selaginella: 97343
Cluster	HCCA clusters: Cluster_7

Target	Alias	Description	ECC score	Gene Family Method	Actions
Brara.A01120.1	No alias	Unknown function	0.02	Orthogroups_2024-Update
PSME_00031408-RA	No alias	(at4g30700 : 283.0) Pentatricopeptide repeat (PPR)...	0.02	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0008270	zinc ion binding	IEA	InterProScan predictions
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043169	cation binding	None	Extended
MF	GO:0046872	metal ion binding	None	Extended
MF	GO:0046914	transition metal ion binding	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0004133	glycogen debranching enzyme activity	IEP	Predicted GO
MF	GO:0004134	4-alpha-glucanotransferase activity	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR032867	DYW_dom	353	477
IPR002885	Pentatricopeptide_repeat	183	212
IPR002885	Pentatricopeptide_repeat	256	279
IPR002885	Pentatricopeptide_repeat	157	180
IPR002885	Pentatricopeptide_repeat	49	76
IPR002885	Pentatricopeptide_repeat	78	107

External Links

No external refs found!