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  5. Sopen01g035200

Sopen01g035200


Description : Eukaryotic translation initiation factor eIF2A


Gene families : OG_42_0004354 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0004354_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Sopen01g035200
Cluster HCCA clusters: Cluster_122

Target Alias Description ECC score Gene Family Method Actions
At5g25780 No alias Eukaryotic translation initiation factor 3 subunit B... 0.04 Orthogroups_2024-Update
Bradi1g13850 No alias translation initiation factor 3B1 0.03 Orthogroups_2024-Update
Brara.D01504.1 No alias component *(eIF3b) of eIF3 mRNA-to-PIC binding complex 0.06 Orthogroups_2024-Update
Cre03.g190100 No alias eukaryotic translation initiation factor 3B-2 0.06 Orthogroups_2024-Update
GRMZM2G174757 No alias translation initiation factor 3B1 0.03 Orthogroups_2024-Update
Glyma.03G002400 No alias translation initiation factor 3B1 0.04 Orthogroups_2024-Update
Glyma.07G107700 No alias translation initiation factor 3B1 0.03 Orthogroups_2024-Update
HORVU5Hr1G106440.1 No alias component *(eIF3b) of eIF3 mRNA-to-PIC binding complex 0.11 Orthogroups_2024-Update
Mp8g14030.1 No alias component eIF3b of eIF3 mRNA-to-PIC binding complex 0.07 Orthogroups_2024-Update
PSME_00017784-RA No alias (at5g27640 : 1064.0) encodes a member of eukaryotic... 0.05 Orthogroups_2024-Update
Pp1s130_248V6 No alias eukaryotic translation initiation factor 3 0.07 Orthogroups_2024-Update
Pp1s138_36V6 No alias eukaryotic translation initiation factor 3 0.05 Orthogroups_2024-Update
Seita.9G315300.1 No alias component *(eIF3b) of eIF3 mRNA-to-PIC binding complex 0.1 Orthogroups_2024-Update
Sobic.001G291800.1 No alias component *(eIF3b) of eIF3 mRNA-to-PIC binding complex 0.09 Orthogroups_2024-Update
Solyc01g088370 No alias Eukaryotic translation initiation factor 3 subunit B... 0.13 Orthogroups_2024-Update
evm.model.contig_4406.11 No alias (p56821|if39_tobac : 424.0) Eukaryotic translation... 0.04 Orthogroups_2024-Update
evm.model.tig00020848.60 No alias (at5g25780 : 644.0) member of eIF3b - eukaryotic... 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR013979 TIF_beta_prop-like 404 604
No external refs found!