Description : seryl-tRNA synthetase / serine--tRNA ligase
Gene families : OG_42_0003118 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0003118_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | Selaginella: 99251 | |
Cluster | HCCA clusters: Cluster_216 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
At5g27470 | No alias | Serine--tRNA ligase, cytoplasmic... | 0.02 | Orthogroups_2024-Update | |
Brara.B03543.1 | No alias | serine-tRNA ligase & EC_6.1 ligase forming carbon-oxygen bond | 0.03 | Orthogroups_2024-Update | |
Glyma.10G155000 | No alias | seryl-tRNA synthetase / serine--tRNA ligase | 0.03 | Orthogroups_2024-Update | |
Glyma.20G233300 | No alias | seryl-tRNA synthetase / serine--tRNA ligase | 0.05 | Orthogroups_2024-Update | |
HORVU4Hr1G070630.2 | No alias | serine-tRNA ligase & EC_6.1 ligase forming carbon-oxygen bond | 0.05 | Orthogroups_2024-Update | |
HORVU6Hr1G080800.2 | No alias | serine-tRNA ligase & EC_6.1 ligase forming carbon-oxygen bond | 0.03 | Orthogroups_2024-Update | |
Seita.9G503900.1 | No alias | serine-tRNA ligase & EC_6.1 ligase forming carbon-oxygen bond | 0.02 | Orthogroups_2024-Update | |
Solyc01g098880 | No alias | Seryl-tRNA synthetase, putative (AHRD V3.3 *** B9RKX9_RICCO) | 0.04 | Orthogroups_2024-Update | |
Sopen01g042420 | No alias | tRNA synthetase class II core domain (G, H, P, S and T) | 0.05 | Orthogroups_2024-Update |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0000166 | nucleotide binding | IEA | InterProScan predictions |
MF | GO:0004812 | aminoacyl-tRNA ligase activity | IEA | InterProScan predictions |
MF | GO:0005524 | ATP binding | IEA | InterProScan predictions |
BP | GO:0006418 | tRNA aminoacylation for protein translation | IEA | InterProScan predictions |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
BP | GO:0001522 | pseudouridine synthesis | IEP | Predicted GO |
MF | GO:0003676 | nucleic acid binding | IEP | Predicted GO |
MF | GO:0003690 | double-stranded DNA binding | IEP | Predicted GO |
MF | GO:0003723 | RNA binding | IEP | Predicted GO |
MF | GO:0003746 | translation elongation factor activity | IEP | Predicted GO |
BP | GO:0006298 | mismatch repair | IEP | Predicted GO |
BP | GO:0006414 | translational elongation | IEP | Predicted GO |
BP | GO:0006790 | sulfur compound metabolic process | IEP | Predicted GO |
BP | GO:0009451 | RNA modification | IEP | Predicted GO |
BP | GO:0016226 | iron-sulfur cluster assembly | IEP | Predicted GO |
MF | GO:0016879 | ligase activity, forming carbon-nitrogen bonds | IEP | Predicted GO |
MF | GO:0016884 | carbon-nitrogen ligase activity, with glutamine as amido-N-donor | IEP | Predicted GO |
BP | GO:0022613 | ribonucleoprotein complex biogenesis | IEP | Predicted GO |
MF | GO:0030983 | mismatched DNA binding | IEP | Predicted GO |
BP | GO:0031163 | metallo-sulfur cluster assembly | IEP | Predicted GO |
BP | GO:0034645 | cellular macromolecule biosynthetic process | IEP | Predicted GO |
BP | GO:0042254 | ribosome biogenesis | IEP | Predicted GO |
BP | GO:0044085 | cellular component biogenesis | IEP | Predicted GO |
BP | GO:0071840 | cellular component organization or biogenesis | IEP | Predicted GO |
No external refs found! |